Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1732 |
Symbol | |
ID | 5694570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 2080097 |
End bp | 2080834 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641264328 |
Product | hypothetical protein |
Protein accession | YP_001529613 |
Protein GI | 158521743 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.127797 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACGAT TCTTTATTGA CGCGGCCGCG GCCGCGGGTG CCATCTGCCC CATCACGGGG CCGGACGCCA ACCACATCAA AAACGTGCTT CGCATGAAGC CCGGCGACGC AATATGGCTG TTTAACGGCG CGGGTATGGA ATTCAAAGGC GTCATTCACT CCGTTGACAG CGAGGCTGTC ACGGTGGAAA TCACCGGTGC CTTTTCCTGT GCCACGGAAT CCCCGATCCG CCTGACCCTG GCCCAGGCCT TTCTCAAGGA CAAAAAGATG GACGCCCTGG TGCGCCAGGC CACAGAATTG GGCGTCACGC GATGGATACC GGTGTTTACA CAGCGGACCA TTCCCCGGCC CGATGCCAGG CGGGTGTCAT CAAGAATGGA ACGGTGGCAG GCCATTGCCG CCGAATCCCT GAAGCAGTGC GGAAGAGGAC GGCTTCCGGA AATTGAGCCG CCGATCCTGT TTGAGGACCT GCTCTCCCGG AGTGATGACT GGTCTTTGAA AATCATTTTT GCCGACGCTA AGGCACCGGG ACTGAACGAC ACGCTACCCT CTCAGGAGGC TACCGTCCGC CGGGTGCTGG TGATGATCGG GCCGGAAGGC GGGTTTACGC CTGAGGAAAT CGACCGCGCG ATAAAAAAGG GGTTTATCGC CGCAAGCCTT GGCCCCCGCA TCCTGAAGGC CGACACCGCC ACTGTTGGAG CCTGCGCTAT TGTGCAGCAC CTGCTGGGCG ACATGTAG
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Protein sequence | MRRFFIDAAA AAGAICPITG PDANHIKNVL RMKPGDAIWL FNGAGMEFKG VIHSVDSEAV TVEITGAFSC ATESPIRLTL AQAFLKDKKM DALVRQATEL GVTRWIPVFT QRTIPRPDAR RVSSRMERWQ AIAAESLKQC GRGRLPEIEP PILFEDLLSR SDDWSLKIIF ADAKAPGLND TLPSQEATVR RVLVMIGPEG GFTPEEIDRA IKKGFIAASL GPRILKADTA TVGACAIVQH LLGDM
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