Gene Dole_1732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1732 
Symbol 
ID5694570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp2080097 
End bp2080834 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content60% 
IMG OID641264328 
Producthypothetical protein 
Protein accessionYP_001529613 
Protein GI158521743 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.127797 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGAT TCTTTATTGA CGCGGCCGCG GCCGCGGGTG CCATCTGCCC CATCACGGGG 
CCGGACGCCA ACCACATCAA AAACGTGCTT CGCATGAAGC CCGGCGACGC AATATGGCTG
TTTAACGGCG CGGGTATGGA ATTCAAAGGC GTCATTCACT CCGTTGACAG CGAGGCTGTC
ACGGTGGAAA TCACCGGTGC CTTTTCCTGT GCCACGGAAT CCCCGATCCG CCTGACCCTG
GCCCAGGCCT TTCTCAAGGA CAAAAAGATG GACGCCCTGG TGCGCCAGGC CACAGAATTG
GGCGTCACGC GATGGATACC GGTGTTTACA CAGCGGACCA TTCCCCGGCC CGATGCCAGG
CGGGTGTCAT CAAGAATGGA ACGGTGGCAG GCCATTGCCG CCGAATCCCT GAAGCAGTGC
GGAAGAGGAC GGCTTCCGGA AATTGAGCCG CCGATCCTGT TTGAGGACCT GCTCTCCCGG
AGTGATGACT GGTCTTTGAA AATCATTTTT GCCGACGCTA AGGCACCGGG ACTGAACGAC
ACGCTACCCT CTCAGGAGGC TACCGTCCGC CGGGTGCTGG TGATGATCGG GCCGGAAGGC
GGGTTTACGC CTGAGGAAAT CGACCGCGCG ATAAAAAAGG GGTTTATCGC CGCAAGCCTT
GGCCCCCGCA TCCTGAAGGC CGACACCGCC ACTGTTGGAG CCTGCGCTAT TGTGCAGCAC
CTGCTGGGCG ACATGTAG
 
Protein sequence
MRRFFIDAAA AAGAICPITG PDANHIKNVL RMKPGDAIWL FNGAGMEFKG VIHSVDSEAV 
TVEITGAFSC ATESPIRLTL AQAFLKDKKM DALVRQATEL GVTRWIPVFT QRTIPRPDAR
RVSSRMERWQ AIAAESLKQC GRGRLPEIEP PILFEDLLSR SDDWSLKIIF ADAKAPGLND
TLPSQEATVR RVLVMIGPEG GFTPEEIDRA IKKGFIAASL GPRILKADTA TVGACAIVQH
LLGDM