| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1729 |
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| Symbol | |
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| ID | 5694567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 2074946 |
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| End bp | 2077600 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641264325 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_001529610 |
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| Protein GI | 158521740 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGCA GTGAACTGGA CAAGGGATAT GTGGCCCAGG GTGTGGAGCA GCGGTGGTAT
GACTTCTGGG AAAAGGAAAA ACTGTTTGCC GCAAGCGAGG AGGGCCATGG CAGACCCGGC
TACTCTATTG TAATTCCACC CCCCAACGTC ACGGGCATGC TGCACATGGG CCATGCCCTG
AACATTACCC TTCAGGACAT TCTCTGCCGC TACCGGCGGC TGTGCGGAGA CAACGTGCTC
TGGGTGCCGG GCACCGATCA TGCCGGTATT GCCACCCAGA ACGTGGTGGA AAAAAAGCTG
ATGGCCGAAG GCACGGACCG CCACGCCCTT GGCCGGCAGG CGTTTATCGA CCGGGTGTGG
GCATGGCGCA AGGAGTACGG CGGCACCATC ATTCGCCAGC TCAAACGGCT GGGGGCCTCC
TGCGACTGGG ACCGGGAGCG GTTTACCATG GATGACGGTC TCTCCAGGGC CGTTCGCGAG
GTGTTTGTCC GCCTTCACCG GGAAGGGCTG ATCTACCGGG GTGAATACCT GATCAACTGG
TGCCCCCGGT GCCACACCGC CATTGCCGAT ATTGAAGTGA CCTATGACGA GCGCCAGGGC
GCCCTCTACC ATATTCACTA CCCTTTTGAA GACGGCAGCC AGGGGCTTGT GGTGGCCACC
ACCCGGCCGG AAACCATGCT GGGCGACACC GCTGTGGCGG TAAACCCGGA TGACGAACGG
TATGCCCACG CAAAGGGCCG TAAGGTGCTG CTGCCCCTTA CCGGCCGGAC CATTCCGGTG
ATCGAGGACC GGTACGTGGA CACCGCCTTT GGTACCGGGG CGCTCAAGGT AACGCCGGCC
CACGATCCCA ACGACTTTGA ACTGGGCCGG GTCCACGGCC TGGACACCAT CAAGGTGATT
GATGACCGGG GGTTTATGAC TGAAGCCGCA GGCGATCGGT TTGCCGGCCT GGAGCGGTTT
GCCTGCCGCA AGGCCGTGGT GGCGGCATTA GAAGCCGAAG GACTGCTGGT AAAGGTTGAA
GACTACACCC ACAGCGTGGG CACCTGCTAC CGGTGCCAGA CCGTGATTGA GCCCAACCTC
TCCAAACAGT GGTTTGTTGC CGTAAAGCCC CTGGCCGAAA AAGCCATCGA GGCGGTGGCG
CAGGGCCGGA CCCGTATTGT GCCCGACACC TGGACCAAGA CCTATTATGA GTGGATGAAC
AACATTCGGG ACTGGTGCGT CTCCCGGCAG ATATGGTGGG GCCACCAGAT TCCGGCCTGG
TACTGCCAGG CCTGCGGCGA GGTGATCGTG GCCGAAGAGA CGCCAACCGC CTGCACCGCC
TGCAACAGCA CCGACCTGGT CCAGGAGAGC GACGTGCTCG ACACCTGGTT CAGCTCGGCG
TTGTGGCCCT TTTCCACCCT GGGCTGGCCC GACCGGACCC GGTTGCTGGA GACTTTCTAT
CCCACCAGCG TGCTGGTCAC CGGGTTTGAC ATTCTCTTTT TCTGGGTGGC CCGCATGCTG
ATGATGGGGC TTCACTTTAT GAAGGAGATT CCCTTTCACG ATGTCTACAT TCATGCCCTG
GTGCGCGACG AAGAGGGCAA GAAGATGAGC AAGTCCACGG GCAACGTGAT CGACCCCATC
GACATCATCA ACACGTACGG GGCCGACGCC CTGCGGTTCA CCCTTACCGC CTTTGCGGCC
CAGGGCCGGG ACATCAAGCT TTCCGAAAGC CGCATCGAGG GGTATCGCCA TTTTATCAAC
AAGCTCTGGA ACGCGGCACG GTTTGCCATG ATGCACGTGG ACCGGGGATA CGAGGAACCG
CCGCCCGCGA ATGCCGGCCT GGCCGACCGG TGGATTCTTT CCCGGCTGGA TAACGCCCGA
AAAAGCACGG CCGACGCCCT GGACACCTAC CGGTTCAACG ATGCCGCCGG CGCCCTCTAC
CAGTTTGTGT GGCACGAACT GTGCGACTGG TACCTGGAGG CGGCCAAACC CGATCTTTAC
GGGAAAAACG GGGAAGAACA GAAGGAAAAG ACAAAACAGG TGCTCTGGCA CGTGCTGCGT
GACACCCTTG TCCTGCTGCA TCCCATCATT CCTTTTGTCA CCGAAGAGAT ATGGCACGCC
CTGCCCGGAA CCCAGGGGTC GATCATGAAG GCCTCATTTT CCGGCGCCGG CGGCACAGGA
TCTGATGTCG ATGCCGAATC CCGCATGGCC CTGGTCATTG ACGTGGTCAC CGGCATTCGC
AACGTGCGGG GCGAGATGAA CATTCCACCT TCAAAAAACC TGGACGTGGT GGTCCATGTG
GCGGATGAGA CGGTCCACCG GCACCTGGAA GAGCAGCAGG AGATGATCAT CAACCTGGCC
CGGCTGGCAT CCTTTTCCAT TGCCCCGTCC GGTGAAAAAC CCGGGCACGC GGCCGTTTCA
GTTGTAGGAG AGGCGTTGGT CTACGTGCTG CTGGAAGGAG TGATCGATTT TGCCGCAGAA
CTGGCCCGCA TTGAAAAAGA ACTGGCAAAG GTGGAAAAGG AGCTGGACGG GGTGACCAGA
AAGCTTTCCA ACAGCGGGTT TCTGGAAAAG GCCCCGGCTT CGGTGGTAGA CGCCGTCAAG
GCCACCTCCG GCGAACTGAC CGAAAAACAG GCCAAGCTCA AGGCGGCCCA TGAGCGGATT
CGGGCGTTTG TCTGA
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| Protein sequence | MSGSELDKGY VAQGVEQRWY DFWEKEKLFA ASEEGHGRPG YSIVIPPPNV TGMLHMGHAL
NITLQDILCR YRRLCGDNVL WVPGTDHAGI ATQNVVEKKL MAEGTDRHAL GRQAFIDRVW
AWRKEYGGTI IRQLKRLGAS CDWDRERFTM DDGLSRAVRE VFVRLHREGL IYRGEYLINW
CPRCHTAIAD IEVTYDERQG ALYHIHYPFE DGSQGLVVAT TRPETMLGDT AVAVNPDDER
YAHAKGRKVL LPLTGRTIPV IEDRYVDTAF GTGALKVTPA HDPNDFELGR VHGLDTIKVI
DDRGFMTEAA GDRFAGLERF ACRKAVVAAL EAEGLLVKVE DYTHSVGTCY RCQTVIEPNL
SKQWFVAVKP LAEKAIEAVA QGRTRIVPDT WTKTYYEWMN NIRDWCVSRQ IWWGHQIPAW
YCQACGEVIV AEETPTACTA CNSTDLVQES DVLDTWFSSA LWPFSTLGWP DRTRLLETFY
PTSVLVTGFD ILFFWVARML MMGLHFMKEI PFHDVYIHAL VRDEEGKKMS KSTGNVIDPI
DIINTYGADA LRFTLTAFAA QGRDIKLSES RIEGYRHFIN KLWNAARFAM MHVDRGYEEP
PPANAGLADR WILSRLDNAR KSTADALDTY RFNDAAGALY QFVWHELCDW YLEAAKPDLY
GKNGEEQKEK TKQVLWHVLR DTLVLLHPII PFVTEEIWHA LPGTQGSIMK ASFSGAGGTG
SDVDAESRMA LVIDVVTGIR NVRGEMNIPP SKNLDVVVHV ADETVHRHLE EQQEMIINLA
RLASFSIAPS GEKPGHAAVS VVGEALVYVL LEGVIDFAAE LARIEKELAK VEKELDGVTR
KLSNSGFLEK APASVVDAVK ATSGELTEKQ AKLKAAHERI RAFV
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