| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1711 |
|---|
| Symbol | glyQ |
|---|
| ID | 5694549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 2054073 |
|---|
| End bp | 2054975 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641264307 |
|---|
| Product | glycyl-tRNA synthetase subunit alpha |
|---|
| Protein accession | YP_001529592 |
|---|
| Protein GI | 158521722 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.271634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGAA CAATGAATTT TCAAGAAATT ATTTTAAACC TTCAGCGGTT CTGGGCAAAA
AAGGGGTGCG TACTGGTCCA GCCCTACGAC ATGGAGGTGG GGGCAGGAAC GTTTCATCCG
GAGACATTGC TGCGGGCCCT TGGTCCGGAA CCCTGGCAGG TCGCCTATGT TCAGCCCTCA
CGCCGGCCCA CGGACGGCCG GTACGGCGAA AACCCCAACC GGCTTCAGCA CTACTACCAG
TTTCAGGTAA TGCTCAAACC TTCTCCCGGC AATGTGCAAC AGCTCTACCT TAAAAGCCTG
GCCACTCTGG GCATTTTCGC GTCGGACCAC GACATCCGGT TTGTGGAAGA TGACTGGGAA
TCCCCGACGC TGGGCGCCTC GGGCCTGGGT TGGGAGGTGT GGCTGGACGG CATGGAGATT
ACCCAGTTCA CCTATTTTCA GGCTGCCGGC AGCATTGATC TTTCACCGGT GTCGGTGGAG
ATTACTTACG GCCTGGAACG GATCGCCATG TACATGCAGG GCATCAACAA CGTCTACGAC
CTGGTGTGGC GCGATCATAT CACCTACGGT CACCTGCATC ACCGGCAGGA GGTGGAACAG
TCCGCCTACA ACTTCGAACA CGCCGACGTG GAGATGCTGT TTGACTGTTT CGGAAAGTAC
GAACACGAGG CCGGCCGTAT GATCGCGGAA AGCCTGGTGC TTCCGGCCTA TGAGTACTGC
CTGAAATGTT CCCATACGTT CAATCTGCTG GATGCCAGGG GCGCCATCAG CGTGACCGAA
CGCACCGGTT ACATCAAGCG CATTCGCGAT ATCGCCAGGG CCTGCGCCAC CACCTATCTT
CAACAGCGGG AGGAGATGGG ATTCCCGCTG CTGAATGCCG GGCATAGAGG TACAACGGAA
TGA
|
|---|
| Protein sequence | MNGTMNFQEI ILNLQRFWAK KGCVLVQPYD MEVGAGTFHP ETLLRALGPE PWQVAYVQPS
RRPTDGRYGE NPNRLQHYYQ FQVMLKPSPG NVQQLYLKSL ATLGIFASDH DIRFVEDDWE
SPTLGASGLG WEVWLDGMEI TQFTYFQAAG SIDLSPVSVE ITYGLERIAM YMQGINNVYD
LVWRDHITYG HLHHRQEVEQ SAYNFEHADV EMLFDCFGKY EHEAGRMIAE SLVLPAYEYC
LKCSHTFNLL DARGAISVTE RTGYIKRIRD IARACATTYL QQREEMGFPL LNAGHRGTTE
|
|---|
| |