| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1708 |
|---|
| Symbol | |
|---|
| ID | 5694546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 2051187 |
|---|
| End bp | 2051945 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641264304 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001529589 |
|---|
| Protein GI | 158521719 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1426] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCCCAT CTCCTGATCA TCACACACTC TCATACGGCC GCTATCTGCG CCAGTGTCGA
CTTCAGAGGG GGCTTCGCAT TGAAGACCTG TCACGGGAAC TGAAGATTAC CAAAGAGACG
CTGACGGCTA TCGAGGACGA AGCGTATGCC CGGTTTCCCG ACACGGTTTT TATCAAGGGC
TTTTTAAAGG CGTTTGCAAA AAGTGTGGGG GCCGATATCG ACCAGGTGAT GCAAAGTTAT
ACCCACGAGA TGCGGCTGTT TCGGCATTCC GCGGCTGCGG AGGCCACGAT TGAGACCGAA
AACCGCATGT TCTGGCGAAA GCTGATGCTC TCTTTCGGTG CCTTGATCCT GCTCATTGGG
CTGACCCTTT TTCTGATTCC CGCAAACGAG GGGGAAACAC CTGGCCGGCA ACCGCTGCCA
ATGAAAAAAG AGAACCGGGG GCAAGTCCAG GCTCAGAGTG AAGGCAGCGA CAGGACCGGA
GCACAGCCGG ACACAACCGT TGCACCGGTG GGTGCCCCCG TATCGGGCAA ACAGCTCCTG
GAGATGGCGG CGGTTGAAGA GACATGGGTG AAAATCATTA TTGATAACCA GAAACCAAAA
GAGTACAGCC TGCAACCCGG TGACCGGCTG GCCCTTGAGG CGGCCGACCG CTTTAATATC
CTCATCGGTA ATGCCACCGG ACTTTCTCTT TTTTTCAACC GGCAGCCGGT GGCGGTAAAC
GGGGAAAAAG GGCAGGTGGT GGCCGTGGAA CTCCCATAA
|
|---|
| Protein sequence | MTPSPDHHTL SYGRYLRQCR LQRGLRIEDL SRELKITKET LTAIEDEAYA RFPDTVFIKG
FLKAFAKSVG ADIDQVMQSY THEMRLFRHS AAAEATIETE NRMFWRKLML SFGALILLIG
LTLFLIPANE GETPGRQPLP MKKENRGQVQ AQSEGSDRTG AQPDTTVAPV GAPVSGKQLL
EMAAVEETWV KIIIDNQKPK EYSLQPGDRL ALEAADRFNI LIGNATGLSL FFNRQPVAVN
GEKGQVVAVE LP
|
|---|
| |