| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1683 |
|---|
| Symbol | |
|---|
| ID | 5694520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 2013319 |
|---|
| End bp | 2014233 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641264278 |
|---|
| Product | 3-hydroxybutyryl-CoA dehydrogenase |
|---|
| Protein accession | YP_001529564 |
|---|
| Protein GI | 158521694 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000000683319 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACCGG TCAGGGCGGA TCAGATCAAA AAAGTGCTTA TTCTGGGGGC CGGTACCATG
GGCCAGCAGA TCGGTTTTCT ATGTGCCGCC AAGGGGTTTG AAACCGCTAT CTACGATCTC
TCCCCTCCCC TGCTGGACAC GGCAAAAAAG CGGCTTGAAA AGCTTGCCGG CCGGTTCGTC
TCCCGTCACC GCCTCACCGG AGAAGAGGCC GCGGCCGCCA TGGCAAGGGT CACCCTGACC
CCGGACAGCG AGCAGGCCGC GGCGAATGCG GACTTTATCA GCGAATCTGT GACCGAGTCC
GTGGAGATCA AGTGCCGGGT GTTTGAGACA TTTCACCCAT TGTGCCCTGC CCGGGCGATC
TTCACCACCA ACACATCGTC TTTGATTCCC TCCATGCTGA CACATGCCGT GGGCCGGCCG
GACCGGTTTG CCGCTTTCCA TTTTCATAAC ACCCTGACCT CCGATATCGT GGACATCATG
CCTCACCCCG GCACAACACC GGAAACCGCT GAAACCATCC GGGCCTTTGC CCTTCGCCTG
GGCCAGGTAC CCATCGTATT TAAAAAAGAA AACCACGGCT ATGCCTTTAA TGCCCTTCTG
ATGAACCTCT GCGACACGGC CCTTTTTCTG GCCGCCGGCG GCGTGGCCGC CATTGAGGAC
ATCGACCGGT CCTGGATGGG CATCATGCAC ATGAAGGTCG GGCCTTTCGG TATCATGGAC
TCCATCGGCC TTGACACCGT GCTCAAGGTC AATGAAGTGT GGGCCAACCA GCTCAATGAC
CCCAGGGCCA TCACCAATGT TGAATTTCTA AAAAAATATG TTAATGAAGG AAAGCTGGGA
GAAAAAACCG GAGAAGGCTT TTACCGGTAC CCGGATCCGG CCTTCAGGCA CAAAAACTTC
ATAAACCAGG CCTGA
|
|---|
| Protein sequence | MEPVRADQIK KVLILGAGTM GQQIGFLCAA KGFETAIYDL SPPLLDTAKK RLEKLAGRFV
SRHRLTGEEA AAAMARVTLT PDSEQAAANA DFISESVTES VEIKCRVFET FHPLCPARAI
FTTNTSSLIP SMLTHAVGRP DRFAAFHFHN TLTSDIVDIM PHPGTTPETA ETIRAFALRL
GQVPIVFKKE NHGYAFNALL MNLCDTALFL AAGGVAAIED IDRSWMGIMH MKVGPFGIMD
SIGLDTVLKV NEVWANQLND PRAITNVEFL KKYVNEGKLG EKTGEGFYRY PDPAFRHKNF
INQA
|
|---|
| |