| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1675 |
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| Symbol | |
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| ID | 5694512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1992248 |
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| End bp | 1993921 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641264270 |
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| Product | PfaD family protein |
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| Protein accession | YP_001529556 |
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| Protein GI | 158521686 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | [TIGR02814] PfaD family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.752172 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCGA GAATTGACCG TTGTTCAGCC GGATTATCCG GCTGTGGAAT ATGGAACAAT
GAAAAAGGGG CGGCGCCGGA AACCGGCGTG GACGCCGTCT CTGTCGCCCT GAAAAATCTT
TCCCGGCCGG TCTTTGCGGT TAATGTCAAC GGCTGCCTGG GCGTGGCCAA TCATGGCCAG
GCCTGCATTT CTATCGGAAA AAATCATGAT GCCGAAGGCG GCTTTCCCCT TCTGGGATAT
GCCCCACCGC TTCTGCCGGA AAATTTCGGT GATCCCTATT TTAAAGAGCT GATCGGCATT
CGCTACGCCT ATGTGGCCGG CGCCATGGCC AACGGCATCA CTTCTGTTGC CATGGTGGAG
GCCGCGGCCA GAGCCGGCAT GGTGGGTTTT TTCGGAGCCG CCGGCCTGGC CCCCGCCGAG
GTGGAAACGG CCATTGACCA GCTTCACCAA CGCCTGGGTG ATCTTCCCTT TGGCATGAAC
CTGATCCATT CGCCCGGCGA TTCCCTGCTG GAAGAGGCCG TGGTGGATCT CTACCTGCGC
AAAAACGTGC GGCTGATCAG CGCGTCGGCC TTTATGCGGC TGACCCCTTA TATCGTGCGT
TATCGGTTGA CCGGTATTCA TAAAGACACC ACCGGCCGGG TTGTGGCCCC CAACCGCATC
GTGGCAAAGG TCTCCCGGGT GGAGGTGGCG GCCCGTTTTT TTGCCCCGCC CCCTGAAAAA
CTGGTGGCCC AGCTTCTGGA CCAGGGAAAG ATCACGGCCG AAGAGGCGGC CCTGGCGTCC
GCGATTCCCA TGGCCGATGC CCTTACCGCG GAGGCTGATT CCGGAGGTCA CACGGACAAC
CGGCCGGCCC TGGGCCTGCT GCCCACCATG ACGGCCCTGA GGGACGAGAT GTGCCGGACC
CACGCCTATG ACCGGCCCAT TCCCGTGGGA CTGGGCGGTG GCATTGCCAC GCCGGAGTCG
GCGGCCGCCG CTTTTGCCAT GGGCGCGGCC TATGTGCTGA CCGGCTCGGT GAACCAGTCC
TGCGTGGAGG CTGGTGTGAC GGACATGGTG CGGCAGATGC TGGTGGAGGC GGGCCAGGCC
GACGTAACCA TGGCGCCGGC GGCCGACATG TTTGAAATGG GCGGCAAGGT GCAGGTGCTC
AAGCGGGGCA CCATGTTTGC CATGCGGGCC TCCAAGCTTT ACGAGCTTTA CGTGCGGTAC
AACCGGTTTG ACCAGGTGCC GGAAAAGGAC AGGGAAATGG TGGAAAAGAC CCTGCTTCGC
TGCTCCTTTG ACCATGCATG GGAAGAGACA AAAACGTTTT TCCAGGCCCG TGATCCCCGC
CAGATTGAGC GGGCTGAAAA AGACCCGCGT CACATGATGG CCCTGGTGTT CCGTTCCTAC
CTGGGCCGTT CCTCCATGTG GGGCGTGACC GGAGAGGCGG ACCGCAAGGT GGACTTTCAG
ATCTGGTGCG GCCCGGCCAT CGGGGCCTTT AATGAGTGGG CAAAGGGCAG TTTTCTGGAG
GCCATGGAGA ACCGGACCTT TGTCACGGTG GCCATGAACC TGCTCTTCGG CGCGGCCGTG
GTGACCCGGG CCGTGTGGCT TGGCCTTCAG GGCGTGGATC TGCCGGTGGA AGCCCGCCGG
TTTGCTCCCA CGCCCCTTGC CGAGATCGAG GCGTATATGA AGCGTCAAGT CTGA
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| Protein sequence | MNARIDRCSA GLSGCGIWNN EKGAAPETGV DAVSVALKNL SRPVFAVNVN GCLGVANHGQ
ACISIGKNHD AEGGFPLLGY APPLLPENFG DPYFKELIGI RYAYVAGAMA NGITSVAMVE
AAARAGMVGF FGAAGLAPAE VETAIDQLHQ RLGDLPFGMN LIHSPGDSLL EEAVVDLYLR
KNVRLISASA FMRLTPYIVR YRLTGIHKDT TGRVVAPNRI VAKVSRVEVA ARFFAPPPEK
LVAQLLDQGK ITAEEAALAS AIPMADALTA EADSGGHTDN RPALGLLPTM TALRDEMCRT
HAYDRPIPVG LGGGIATPES AAAAFAMGAA YVLTGSVNQS CVEAGVTDMV RQMLVEAGQA
DVTMAPAADM FEMGGKVQVL KRGTMFAMRA SKLYELYVRY NRFDQVPEKD REMVEKTLLR
CSFDHAWEET KTFFQARDPR QIERAEKDPR HMMALVFRSY LGRSSMWGVT GEADRKVDFQ
IWCGPAIGAF NEWAKGSFLE AMENRTFVTV AMNLLFGAAV VTRAVWLGLQ GVDLPVEARR
FAPTPLAEIE AYMKRQV
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