Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1661 |
Symbol | |
ID | 5694498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1976451 |
End bp | 1977209 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641264256 |
Product | hemolysin A |
Protein accession | YP_001529542 |
Protein GI | 158521672 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1189] Predicted rRNA methylase |
TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0132682 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCCTG TAGTTAAAAA ACGGCTGGAC CAGCTGCTGG TGGAAAAGGG CCTGGCCCCC ACCCGGCAGA AGGCCCAGGC CATGATCATG GCCGGCGCCG TGCTGGTGGA TGACCACCCC GCGGACAAGG CCGGCGTTCA GGTGCCGGTG ACCGCCGCCA TCGTCACCCG GGACGCCTGC CCCTACGTCA GCCGGGGTGG CCTGAAGCTG GAAGGCGGGC TGGACGCGTT TGGCCTGGAT GTCACCGGCA AGGTCTGTCT TGATGTGGGG GCCTCCACCG GCGGGTTTAC CGACTGCCTG CTGACCCGGG GAGCCCGCCG AGTGTTTGCC GTGGACGTGG GCTACGGCCA GCTGGCCTGG AAGCTGCGCC AGGACCCCCG GGTGGTTGTC ATCGAGCGCA CCAACATTCG GCACATGGCC GCCGACGCCC TGCCCTGCCC GGTCGACCTG GTGACCATTG ACGCCTCTTT TATCTCCCTG AAAATTGTGA TGCCGGCGGT CGTCGGCTTC ATGAAGCCCG AAGCCGTGAT CCTGGCCCTT ATCAAGCCCC AGTTTGAAGT GGGCAAGGGC AAGGTGGGAA AAGGCGGCGT GGTGCGTGAC CCGGGCCAGC ACCGGGAGGT GCTCGACGAC CTTTGCCGAT GGGCCAAAAC CCAGGGACTC TGGTGCGCGG ACGCGGTGGT TTCCCCCATC ACCGGACCCA AGGGAAACGT GGAATTTTTT AACCTGTTTG GCCTTGATTT TTCTAAAAAT ACAAGATAG
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Protein sequence | MSPVVKKRLD QLLVEKGLAP TRQKAQAMIM AGAVLVDDHP ADKAGVQVPV TAAIVTRDAC PYVSRGGLKL EGGLDAFGLD VTGKVCLDVG ASTGGFTDCL LTRGARRVFA VDVGYGQLAW KLRQDPRVVV IERTNIRHMA ADALPCPVDL VTIDASFISL KIVMPAVVGF MKPEAVILAL IKPQFEVGKG KVGKGGVVRD PGQHREVLDD LCRWAKTQGL WCADAVVSPI TGPKGNVEFF NLFGLDFSKN TR
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