| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1656 |
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| Symbol | |
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| ID | 5694493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1968731 |
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| End bp | 1969417 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641264251 |
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| Product | protein-tyrosine-phosphatase |
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| Protein accession | YP_001529537 |
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| Protein GI | 158521667 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4464] Capsular polysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCGATA TTCACAACCA CATTCTGCCG GGTATTGATG ATGGTGCGGC AGACATTGGC
CAGTCCCTGG CCATGGCCCG CATGGCGGAA AAAGACGGCA TTACCGACAT TGTCGCCACC
CCTCATCTGA TGGATCCGCA ACTGGACCGG CCAGCCATTC TTGAACGCGT TTCAGTGTTA
AACAGCAAAC TGACGGCCGA CGGTATTCAT GTCCGGGTAC ATGCCGGCGC TGAAATTCCT
TTTTACATGC TTGAAGAAGC GCGTCACTGG ATCGGCCTGG CCGGCTCAAA ATGCCTGCTG
GTCGAGTTCC CGGCCCATGC CGTTCCCCCG GTGGCCGAGG GCATGTTCCA CCGGGTAGGC
GTGCTTGGGT ATACCGTTAT CATTGCCCAC CCGGAGCGCA ATCTTGAAGT GATGGACCGC
CCGGAGCGGC TCCTGAGCCT GTTGAAACCC GGCATTCTTG TGCAGATCAC GACAGATAGC
CTCACCGGCC GCATGGGGGA AGACGCCCGG GCCTGTGCCA GATACCTGGT GAAAAAAGGG
CATGTGGACT TTATCGCCAC CGACGCCCAT GATGATTCAA CCCGCCCGCC CCTTCTGTCC
GCGGCCCTGG CATCCATACC GGCGTCCGCA AAAGACGACT CCATGAAACT CGTCCGCGAC
AACGCCCTGG CGTATATCCT GTGTTAA
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| Protein sequence | MIDIHNHILP GIDDGAADIG QSLAMARMAE KDGITDIVAT PHLMDPQLDR PAILERVSVL
NSKLTADGIH VRVHAGAEIP FYMLEEARHW IGLAGSKCLL VEFPAHAVPP VAEGMFHRVG
VLGYTVIIAH PERNLEVMDR PERLLSLLKP GILVQITTDS LTGRMGEDAR ACARYLVKKG
HVDFIATDAH DDSTRPPLLS AALASIPASA KDDSMKLVRD NALAYILC
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