Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1652 |
Symbol | |
ID | 5694489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1962912 |
End bp | 1963985 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641264247 |
Product | transport system permease protein |
Protein accession | YP_001529533 |
Protein GI | 158521663 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCCATT TTGACCACGG CCAGGTGCCG GCAGAATACA CCGCCTATAT CGGCCGCAAA CTGTTTTTTC TGGCCGGTCT GCTGGCGGCC GCCGTTCTGC TGATGGTAAT GGCCGTTTCC CTGGGCGCGG TGCGCATTCC CGCCGCGGAA GTGGTCCGGG CCTTTTTCGG CCTGGGCGAA GATGAGCGCT TTGCCCTGAT CATCCGCAAC ATCCGCCTTC CCCACGCCCT GGCCGCCCTG CTGGCCGGGG CTGGCCTGGC TGTTGCCGGA GCGGCCATGC AGTCCATCCT GCGCAACCCT CTGGGCTCTC CCTTCACCCT GGGCATCTCA CAGGCCGGAG CCTTCGGCGC CGCCTTTTCC GTGATGATCC TGGGGGCCGG CGCCATGCAG AGCACCCAGG CCGGCGCGGT CAGCGTCATC AATCCCTGGC TCACCACCCT GCTGGCCTTT GTCTTCTGCA TGATCACCTC CCTGATCATC ATCGCCATTG CCCGCATTCG GGGGGCCAGC CCGGAAGTGC TGGTGCTCAG CGGCGTGGCC CTGGGCGCCC TGTTTTCCGC GGCCACCATG TTTCTTCAAT ACTTTGCCGA CGACATTCAG CTGGCCGCCA TGGTGTTCTG GACCTTCGGC GACGTGGGCC GGGCCGGATG GCCGGAAGTC TGGTTCATGG CCGTGGTGGT GGCGGGTGCG CTTCTGTTTT TCATGTTTAA CCGCTGGAAC TACAACGCCA TTGACGCCGG GGATGAAACC GCCAGAAGCC TGGGGGTCCG GGTGGAGCGG GTACGCATGA TCGGCATGCT GGTCGCTTCC CTGATAACGG CGGTGATCGT GTCGTTTCTG GGCATCATCG GGTTCGTGGG CCTGGTCTGC CCCCATATCG TGCGCCGGGT CATCGGCGAT GACCACCGGT TCCTGCTGCC GGCCTCGGCC CTGACCGGGG CCTGCCTGCT GTTGGCCGCG GACATCGGCG CCCGGCTGAT GCTGGCGCCG AGAATGCTGC CGGTGGCCAT TCTCACGGCC TTTTTCGGAG CGCCCATGTT TCTTTACCTT TTAATCGGGA GACGGCACAC ATGA
|
Protein sequence | MSHFDHGQVP AEYTAYIGRK LFFLAGLLAA AVLLMVMAVS LGAVRIPAAE VVRAFFGLGE DERFALIIRN IRLPHALAAL LAGAGLAVAG AAMQSILRNP LGSPFTLGIS QAGAFGAAFS VMILGAGAMQ STQAGAVSVI NPWLTTLLAF VFCMITSLII IAIARIRGAS PEVLVLSGVA LGALFSAATM FLQYFADDIQ LAAMVFWTFG DVGRAGWPEV WFMAVVVAGA LLFFMFNRWN YNAIDAGDET ARSLGVRVER VRMIGMLVAS LITAVIVSFL GIIGFVGLVC PHIVRRVIGD DHRFLLPASA LTGACLLLAA DIGARLMLAP RMLPVAILTA FFGAPMFLYL LIGRRHT
|
| |