Gene Dole_1647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1647 
Symbol 
ID5694484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1956431 
End bp1957786 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content58% 
IMG OID641264242 
Productglutamate dehydrogenase 
Protein accessionYP_001529528 
Protein GI158521658 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTCA TCAAGAGCGT CATCGACAAG GTCAAGCACA TGGATCCGGA CCAGAAGGAG 
TTCCACCAGG CCGTCATCGA GGTTATGGAG ACACTGGAGC CGACTGCTGA ACGTCATCCC
GAATTTGTTA AAAACGGTAT CTACGAGCGC ATCGTGGAAC CCGAGCGAGC GGTCCAGTTC
CGGGTGCCCT GGGTGGACGA CAAAGGCCAG GTCCAGGTCA ACCGTGGCTT CCGGGTACAG
TTCAACAACG CCATCGGCCC GTTCAAAGGC GGCATCCGTT TTCATCCCTC GGTCAACCTG
GGCATCATCA AGTTCCTGGG GTTTGAGCAG ATTTTCAAAA ATTCCCTCAC CACCCTGGCA
ATGGGCGGTG GCAAGGGCGG TTCCGACTTT GACCCCAAGG GCAAGAGCGA CGGTGAGATC
ATGCGCTTCT GCCAGGCCTT CATGCGGGAG CTCTTCCGGC ACATCGGACC GGAGACTGAC
GTTCCGGCCG GAGACATCGG CGTGGGCGGC CGGGAAATCG GCTACATGTA CGGCTATTAC
AAAAAAATCC GCAACGAACA TACCGGCGTG CTCACGGGTA AAGGACTGGA GTACGGCGGC
AGCCTGATCC GGCCCGAAGC CACCGGCTAC GGCACGGTCT ACTTTGCCTC GGAAATGCTC
GCGACCCGTG GCCTTGACTT CAAAGGCAAA CGAGTGGCGG TAAGCGGGGC GGGCAATGTG
GCCCAGTACG CCATTGAAAA GGTCAACGAG ATGGGTGGCA CGGTGATCTC GGTATGTGAT
TCCGGCGCCA CCATCATTGA TGAAGCGGGC ATCGACAACG ACAAGTGCTG TTATCTCATG
GAACTCAAAA ACGTCCGCCG GGGACGGGTC AACGAATATG CCGACCAGTA CAAAACGGTC
TGTGTTGAAA GTAAAAACGT ATGGGACGTG ATCCGTGAGC AGGGCATTAA AGTGGATGTG
GCCCTGCCCT GCGCCACTCA GAACGAGATC GACGGCGCCA ATGCCGAGGC CCTGGTGAAA
AACGGCTGCA TCTGCGTGGC CGAAGGCGCC AACATGCCCT CTTCCCCGGA GGCGGTGCGG
ATTTTCCAGG CCAACAACGT GCTATACGGT CCGGGCAAGG CGGCCAACGC CGGTGGTGTG
GCCACTTCGG GCCTTGAGAT GAGTCAGAAC AGCTCCAAAC TCTCCTGGAC CCGGGAAGAG
GTGGACAGCC GGCTGCTGCT GATCATGAAG GGCATTCACA AGTCCTGCCT GGACGCCGCC
GAAGCCTACG GCAAAAAGGG CGATTATGTC ACCGGCGCCA ACATTGCCGG CTTTGTAAAG
GTGGCCAAGG CCATGCTGGC CTACGGCATC GTGTAA
 
Protein sequence
MSVIKSVIDK VKHMDPDQKE FHQAVIEVME TLEPTAERHP EFVKNGIYER IVEPERAVQF 
RVPWVDDKGQ VQVNRGFRVQ FNNAIGPFKG GIRFHPSVNL GIIKFLGFEQ IFKNSLTTLA
MGGGKGGSDF DPKGKSDGEI MRFCQAFMRE LFRHIGPETD VPAGDIGVGG REIGYMYGYY
KKIRNEHTGV LTGKGLEYGG SLIRPEATGY GTVYFASEML ATRGLDFKGK RVAVSGAGNV
AQYAIEKVNE MGGTVISVCD SGATIIDEAG IDNDKCCYLM ELKNVRRGRV NEYADQYKTV
CVESKNVWDV IREQGIKVDV ALPCATQNEI DGANAEALVK NGCICVAEGA NMPSSPEAVR
IFQANNVLYG PGKAANAGGV ATSGLEMSQN SSKLSWTREE VDSRLLLIMK GIHKSCLDAA
EAYGKKGDYV TGANIAGFVK VAKAMLAYGI V