| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1640 |
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| Symbol | |
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| ID | 5694477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1948266 |
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| End bp | 1949486 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641264235 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001529521 |
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| Protein GI | 158521651 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.868645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGTT TGTTGCATGT GTTGACTGAT TCGACCGGCT TGAGCGCTCT GGGCACGGGG
GCGGTTCTGC TTCTGGCGGG TGTGCTGGCC TATTATGTTG CCAGGCTGGT TCTCATTCGG
GTTATTCACC GCCTGGCCAG AAAGACCCAG TTCCAGTGGG ATGATGTGCT GGTGGAGATG
GGCGTGTTTT CCGCGCTGGC GTTTTTTGCG CCGGCCGTGG TTGTGTCTTA TGGTGTGCGG
ATTTTCCCGG AATTCGACCA AACCCTTGTC CATAACGGGT TGACCGTCTA TCTCACCATC
GTGACCCTGG GGCTGATCAG CAGGACCCTC AACGCGGGCC TGGCCATTTA CGAACAGTTT
CCCGTGTCCG TGCGCCGGCC GCTGAAGGGG TATGTCCAGC TGGTCAAGAT TTTTGTTTTT
ATCATCGGTG TTGTCGTGGC CCTGGCCCTC CTGCTGGGAA TGTCGCCCTG GAAGCTGGTT
TCCGGTATCG GGGCCATGAC GGCCGTGATC ATGCTGATTT TCAAGGACAC CATTCTCTCT
TTTGTGGCCA GTATTCAGAT CGCCGGCAAC GATCTTTTTC GCAAAGGGGA CTGGATTGAG
ATGTCCGCCA TGGGAGCGGA CGGGGACGTG ATCGATATCG CCCTGCACAC GGTAAAGGTC
CAGAACTGGG ACAAGACCAT CGTCTCCATT CCCACCCACA AGTTTTTAGA CCATACCTTT
AAAAACTGGC GGGGCATGCA GGAGGCCAAA GGCCGCCGGA TCAAGCGGTC GGTGCTGATC
GACCAGTCCA GCATCGGGTT TCTGGAGGGC CGTGTCCTGG AGCGGGTCAA AAAAATCGGG
TTGCTTTCCG GTTACCTGGA AAAGAAAGAA AAAGAGCTGG CCGAATGCAA CAGGGATATA
ACGGACACCG ATACCCTGCC GTTAAACGGC CGGCGGCTGA CCAATATCGG AACATTGCGT
GCCTACGTCC GGGCCTACCT GGAACATCAT CCGAAGATCC GGCAGGACAT GACCCTTCTG
GTGCGTCATC TTCAGCCCGA GGCCGACGCC GGCCTGCCCC TGGAGATATA CGCGTTTACA
TCGGACACGG CCTGGGCCGA TTACGAGGCG GTGCAGGCGG ATATCTTCGA CCATATCCTG
GCCGTCCTGC CCCTGTTCGG ACTGCGGGCC TACCAGCGGA ACGCCCTTGT AGACGCCCGA
TCAAGCGCGC ATACGGAATA A
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| Protein sequence | MESLLHVLTD STGLSALGTG AVLLLAGVLA YYVARLVLIR VIHRLARKTQ FQWDDVLVEM
GVFSALAFFA PAVVVSYGVR IFPEFDQTLV HNGLTVYLTI VTLGLISRTL NAGLAIYEQF
PVSVRRPLKG YVQLVKIFVF IIGVVVALAL LLGMSPWKLV SGIGAMTAVI MLIFKDTILS
FVASIQIAGN DLFRKGDWIE MSAMGADGDV IDIALHTVKV QNWDKTIVSI PTHKFLDHTF
KNWRGMQEAK GRRIKRSVLI DQSSIGFLEG RVLERVKKIG LLSGYLEKKE KELAECNRDI
TDTDTLPLNG RRLTNIGTLR AYVRAYLEHH PKIRQDMTLL VRHLQPEADA GLPLEIYAFT
SDTAWADYEA VQADIFDHIL AVLPLFGLRA YQRNALVDAR SSAHTE
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