| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1629 |
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| Symbol | |
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| ID | 5694466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1936802 |
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| End bp | 1938118 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641264224 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001529510 |
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| Protein GI | 158521640 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATT TATTCCGCAT TCAGCAGTTA ACCCGGCGGC TGCCGGTTCT TTTCGCACTT
GCAGCGGCCG TCCTTTTTGC AACCATACTG CCGTGCGGGC ATTCGTCCGC CGCGGAGACC
CTCACGTGGC AGGACTGCGT TCAGGAGGCG TTGGCCCGCC ATCCGGAACT GGCCGTCTCC
AGGGAGTCTT TAAACCAGGC CCTGGCAGAC AGGGACATCG CCAAAAGCCC GGGCCGGCCC
CAGGTGGCCG CCAACGCGTC CAGCAGCCGC GGCGACCGGG ACGACGCCGC GGCAACCACC
TCCCACAGCT TCGGCATCAG CGCCCGGCAG ATGCTCTATG ACGGGAAAAA GACCACCCAC
CAGGTTTCCG CGGCCGAGGC AGCCGTCACC TCCCGGCAGT ACACCCATGA TGTCACCTCC
TCCCGCATTC GCCTGCAACT GCGCACCGCC TTTGTCGACC TGCTCCACGC GCGGGAGCTG
TTAAACATCT CTGAAGAGAT CGCCCGGCGG CGGCGGCAGA ACCTGGAACT GGTAAGGCTT
CGCCACGACG CCGGCCGGGA GCATCGCGGC TCCCTGCTGT CGGCCCGGGC CAACGTGGCC
CAGGCCGAAT ACGAGATCCG CTCGGCCCGG CGCGAGGTCT CCCTTGCCAT GTGGCGGCTG
GCCAGGGAGC TGGGAAGAGA CGGGACCGCG TCAGTAACCG TTGCCGGAGA GCTTTCCGTG
CCGCCAGCCG ATGCCGGCAT GCCCGATTTT GAAGCCCTGA CCGCTGACAA TCCCTTTTTA
AAAGAGCTGA TCGCTCAAAA AGAGGTGTCC CTGGCGAGCA GGGATGCCGT GAAGTCCGGG
TTCTTTCCCC AGGTCTATGC CGATGCATCG GCCGGCAGGA GCGATTCGGA CTGGCCCCCG
GACCGGGACC AGTGGTCCGT GGGCCTGTCG GTCTCGGTGC CCCTGTTTGA AGGGGGCAGC
CGGTTTGCCG AGATGAGAAA GGCCGGGGCA CGGGTGCGCC AGGCCGAGGC CCAGGCGACA
AGCGGCCGGG CTGAAACCCT GCACACCCTG CGCGACGCCT GGATTGCTTT TCAAAACGCC
GTGGACCGGG TGGCCGTGGG CCGGGCCTTT GTTGAAGCCT CTGAAGAGCG GGCAAAAATC
GCCCAGGTGG AATATTCCAA CGGCCTGATC ACCTTTGACA CCTGGGCCAT CATTGAAGAC
GACCTGGAGC GGGACCGGAA AAACTATCTT ACCTTCCTTG CCAACGCCCT GGTGGCTGAA
GCTTACTGGG TTCAGGCAAA GGGCGTAACA CTGGAGCATG ACCTTGAAAA AAACTAA
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| Protein sequence | MKYLFRIQQL TRRLPVLFAL AAAVLFATIL PCGHSSAAET LTWQDCVQEA LARHPELAVS
RESLNQALAD RDIAKSPGRP QVAANASSSR GDRDDAAATT SHSFGISARQ MLYDGKKTTH
QVSAAEAAVT SRQYTHDVTS SRIRLQLRTA FVDLLHAREL LNISEEIARR RRQNLELVRL
RHDAGREHRG SLLSARANVA QAEYEIRSAR REVSLAMWRL ARELGRDGTA SVTVAGELSV
PPADAGMPDF EALTADNPFL KELIAQKEVS LASRDAVKSG FFPQVYADAS AGRSDSDWPP
DRDQWSVGLS VSVPLFEGGS RFAEMRKAGA RVRQAEAQAT SGRAETLHTL RDAWIAFQNA
VDRVAVGRAF VEASEERAKI AQVEYSNGLI TFDTWAIIED DLERDRKNYL TFLANALVAE
AYWVQAKGVT LEHDLEKN
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