| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1628 |
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| Symbol | |
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| ID | 5694465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1935841 |
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| End bp | 1936821 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641264223 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001529509 |
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| Protein GI | 158521639 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTGA AAAAAACTAA CATTCTCCTT CTGATCCTTT CGGTGATGGC AACAGCCGGC
GGGGCCTGGT ATTTTTTCTA CTCCCCGGCC ACAAAACCGG CCAAAGACTT TGTCCTGGAA
GAAATTCTTC CGGAGGTGGG CACCATTGCC GTGACCATCT CCACCACAGG AGTGGTCAAG
CCCAAAAACC GGCTGGAGAT CAAGCCGGCC ATCAACGGCC GGATTGAGGA GATACGGGTC
CGCGAAGGCG ATCATGTAAA GCAGGGCCAG GTGGTGGCCC GCATGAGCTC CACGGAGCGG
GCCGCCCTGC TGGACGCGGC CCTGGGCCAG GGCGAATCCA TGGATTACTG GCAGGACGTT
TACAAGGCCA CGCCCCTGAT GTCACCCATC GACGGCGAAG TGATTGTCCG GGCCGTGGAG
CCGGGCCAGA CCGTGACCAC CCAGGACGCG GTGATCGTGC TGTCCGACCG GCTGATCGTG
GGCGCCCAGA TGGATGAAAC CGACATCGGC ATGGTGCGGC CGGGCCAGAA GGCGGTGATC
TCCCTGGACG CCTACCCCAA CAGTGCCGTG GCGGGCGTGG TGGACCACAT CGCCTACGAG
TCCACAGTGG TCAACAATGT CACGGTCTAC GAGGTGGATA TCCTGCCCGG CACCCTGCCC
GACTTTTTCC GTTCCGGCAT GAGCGCCAAT GTTGATGTCA CGGTAAAAGA GCAGGAAAAC
GCCCTGCTGG TGCCGGTGGA CGCCCTGATT GAGGAAAACG GTGAAAAGAA GCTTTTGGTC
AAACCGGCCG GCGCCAACAC CCCGGTGGAA ACCGTTGTTT CCACCGGCCT TGCCAACACC
GAACAGGTGG CCATCACCAG CGGCATCGAC CCGGACACGG TTGTGGTGAT CCGCCGGCAG
CACTATGAAC TGCCCGCCGG CCAGACCGGG GGAAACCCCT TTTCGCCGTT CGGGTCGCGG
AAAAAACCCC AGGGCAAATG A
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| Protein sequence | MTLKKTNILL LILSVMATAG GAWYFFYSPA TKPAKDFVLE EILPEVGTIA VTISTTGVVK
PKNRLEIKPA INGRIEEIRV REGDHVKQGQ VVARMSSTER AALLDAALGQ GESMDYWQDV
YKATPLMSPI DGEVIVRAVE PGQTVTTQDA VIVLSDRLIV GAQMDETDIG MVRPGQKAVI
SLDAYPNSAV AGVVDHIAYE STVVNNVTVY EVDILPGTLP DFFRSGMSAN VDVTVKEQEN
ALLVPVDALI EENGEKKLLV KPAGANTPVE TVVSTGLANT EQVAITSGID PDTVVVIRRQ
HYELPAGQTG GNPFSPFGSR KKPQGK
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