Gene Dole_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1627 
Symbol 
ID5694464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1933714 
End bp1935690 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content63% 
IMG OID641264222 
ProductABC transporter-related protein 
Protein accessionYP_001529508 
Protein GI158521638 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACGC CAACTGCTGT CGAAAAATCT CATGAAATAC TCAGGCTTGA AAATTTATGC 
CGGGTCTACC GCAGCGGCGA TATAGAGGTT CACGCCCTGC GCGACATCTC CCTGACCATC
GAGGCCGGTG AATTTATCGC CATCATGGGG CCGTCCGGCT CGGGCAAGTC CACCCTGCTC
CATACCCTGG GCCTGCTGGA CCGGCCCGAC AGCGGCACCT ACACCCTGTT CGGCCGGGAC
ACCACAAAAA TGGATGACGA CACCCTGGCC ACCCTGCGCA ACCACCTGGC CGGGTTCGTG
TTTCAGCAGT TTCACCTGCT TCAGCGTTCA TCCGCCCTTG ACAATGTTGC CCTGCCCCTG
GTCTACGCGG GCAGGCGGCA AAAAAAGGAC CGGGCCGAAA AGCGGCTGGC CGAGGTGGGC
CTTTCCCACC GCTCCGGCCA CCGGCCCGGC GAACTCTCCG GCGGCGAGCA GCAGCGGGTG
GCCATTGCCA GGGCACTGGT CAACAACCCG GCCGTCATCT TTGCCGACGA ACCCACCGGC
AACCTGGACA CCAAAAGCGA AGCCGACATA ATGGCGGTGT TAAAGGACTT AAACCGCCGG
GGCAAGACCA TCATCATGGT TACCCACGAA AAGGAGGTGG CCGAACATGC CGGCCGGATC
ATTCTGATGC GCGACGGAAA AATCGTGTCG GATGAAAAAA AGGCGGCCCC GGTCCCCGGC
GACCCGCCGC CGGCACCGGA CCTGCCCGAC CGCGGGGCCG GCCGCATCGC CTTTACCGAC
CACCTGAGGC AGGCCTTTGC CTCGGTCTTC TCCCACAAGA TGCGCTCCTT TCTCTCCATC
CTGGGCATTC TCATCGGCGT GGCCGCGGTA ATCGCCATGC TGGCCCTGGG CCGGGGCGCC
AAGTCCTCCA TTGAAGAGAG CTTGAAATCC CTGGGTTCCA ACCTGCTGGC CATTCGGCCG
GGCACTTCCA TCATGCGCGG CGTGCACACC GCTGGCGGCG ATACCGCCCA GTTTACCGAT
GCCGACGTGA CCGCCGTGGC AAAACTGCCC TCCATCCGCT ATTCCACGGG CATGGTGGGC
GGCGCCGGCC AGATCGTCTT TCAGAACAAG AACTGGAGCA CCCGGGTGGA AGGCGTGGGA
TACGACTACG GCGTGATGCG GGCCTCCCTG CCGGTGGTGG GCCGCTGGTT TACAAAAGAT
GAACTGCGCC GGCGGGCCAA GGTGCTGCTG GTGGGCACCA CCGTGGCAAG GGAGCTGTTC
GGCGAGACCA GCCCCATCGG CAAGACCGTC AAGTTCAACC GCATCAACTT CACCGTCATC
GGCGTGCTGC CGCCCAAGGG TTCCAATGCC TGGCGGGACA ACGACGACGT GGTGCTGATG
CCGGTGACAA CGGCCATGTA CCGGGTGCTG GGCAAAACCC ACCTGGATTT CATGTACGCC
GAAGCCCTCA ACCAGGAGCT GATGGCCACG GCCGAACAGG AGGTGGGCTC CCTGCTGCGT
ACGCGCCAGC GACTGTCCCG GGGCCAGGAC GATACCTTTA CCATTCGGAA CCTGAGCGAT
ATTCAGGAGA CCCTGACCGC CACCACCCGG ACCATGGGGA TCCTGCTGGG CGCCATTGCC
GCCATCTCCC TGCTGGTGGG CGGCATCGGC ATCATGAACA TCATGCTGGT ATCGGTGACC
GAGCGAACCC GGGAGATCGG CCTGCGCATG GCCATCGGGG CCCGGTCAAG AGATATCCTG
ATGCAGTTTC TCATCGAGTC GGTGGTCATG ACCTTCTGGG GCGGCCTGCT GGGCACCCTG
ATGGGCGTGG GCACGGCCAT GGCCCTGTCC CACTTTGCCG GATGGACCAC CCTGGTGGGA
CCGGACAGCA TCCTGCTGGC CACCGTCTTT TCCGTGGCCG TGGGCATCGG CTTCGGCCTG
TGGCCGGCCC GCAAAGCCGC CCACCTCAAC CCGGTGGAAG CGTTGAGGTA CGAATAA
 
Protein sequence
MNTPTAVEKS HEILRLENLC RVYRSGDIEV HALRDISLTI EAGEFIAIMG PSGSGKSTLL 
HTLGLLDRPD SGTYTLFGRD TTKMDDDTLA TLRNHLAGFV FQQFHLLQRS SALDNVALPL
VYAGRRQKKD RAEKRLAEVG LSHRSGHRPG ELSGGEQQRV AIARALVNNP AVIFADEPTG
NLDTKSEADI MAVLKDLNRR GKTIIMVTHE KEVAEHAGRI ILMRDGKIVS DEKKAAPVPG
DPPPAPDLPD RGAGRIAFTD HLRQAFASVF SHKMRSFLSI LGILIGVAAV IAMLALGRGA
KSSIEESLKS LGSNLLAIRP GTSIMRGVHT AGGDTAQFTD ADVTAVAKLP SIRYSTGMVG
GAGQIVFQNK NWSTRVEGVG YDYGVMRASL PVVGRWFTKD ELRRRAKVLL VGTTVARELF
GETSPIGKTV KFNRINFTVI GVLPPKGSNA WRDNDDVVLM PVTTAMYRVL GKTHLDFMYA
EALNQELMAT AEQEVGSLLR TRQRLSRGQD DTFTIRNLSD IQETLTATTR TMGILLGAIA
AISLLVGGIG IMNIMLVSVT ERTREIGLRM AIGARSRDIL MQFLIESVVM TFWGGLLGTL
MGVGTAMALS HFAGWTTLVG PDSILLATVF SVAVGIGFGL WPARKAAHLN PVEALRYE