Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1621 |
Symbol | |
ID | 5694458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1926385 |
End bp | 1928625 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641264216 |
Product | nitrate reductase |
Protein accession | YP_001529502 |
Protein GI | 158521632 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.161606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACAGT GGCACAAAAC AGGATGCGTG CTCTGCGCCC AGAACTGCGG GTTGCAGGTT TTGGTGGAAA ACAACCGCAT GGTCAAGGTA AAGCCGGATA AAGACAACCC CCGCAGCCGG GGCTATGCCT GCCGAAAAGG GCTGAACGTT ATTTATCATC AATACCCCGC CGACCGGATC ACCACCCCCC TGAAACGGGT CGGCGCGGAG TTTGTGCCGA TCTCCTGGGA CCAGGCAGCC ACGGAGATCG CGGAAAAACT GCGCGCCACC GTTAATGCCC ACGGGCCCAG AAGCGTGGCG TACATGGGGG CCAGCTCCCA GGGCGGCCAC ATGGAGGCGG CCTTTGGCCT GACGATACTG CGCGCCCTGG GCTCCCAGAA TTTTTACTCT TCCGCGGGCC AGGAGTTTTC AGGCCACTGG TGGGTGTTCG GTCGCATGCT GGGCCGGCAG TACAGTGTCA CCGGCCCGGA CGAGCACAAC TGCGACATGC TGGTGGCCTG GGGCTGGAAC GGTATGGAAA GCCACCAGGT GCCCCGTGCC CCCATCGTGT TAAAGGAGGT CGCCGACAAC CCGGACAAGC TCCTGGTCGC CATCGACCCC CGCCGCAGCG AAACCGCCCA GATCGCCAAC ATTCACCTGG CCTTGCGGCC GGGCACTGAC GCCCTGCTGA TCAAGGCCAT GATCGCCCTG ATCCTGGCCG AAGGATGGGA AAAGCGCGAC TATCTTTTAC AGCACGTGGA AGGATGGGAC GCCATTCGCC CCTGGTTTGA AAATTTTGAC ATTCGGGCCG CCATTGCCGT GTGCGGACTG GATTATGGGG AGGTGCTTGA GCTGTGCCGC CTGATGGCAA CAAGGCAGTG GGGCGTTCAC CCGGACCTCG GGGTGTTCAT GGGCCGCCGT TCCACGCTCA CCTCCTACCT GCTGATGGTG CTGCAACTGG TGTGCGGCCG GCTGCTGGTG CCGGGCGGCA ACATCGTACC CGGCATGGTC ATGCCCATGG GGTTTCACGC CGACGAGCGG GACGAAAAAA CATGGCGCAC CGTGGCCACC CACATGCCGC CGGCCGCGGC CGGGGCGTTT CCCCCGTCGG TGCTGCCCGA AGAGATCCTG ACCGATCATG CAGACCGGGT CCGGGCCGTG TATGTGAGCG CCTGCAATCC GTTGCGGTCC TATCCGGACA CCACCGCCTA CGAGACCGCT TTTAAAAAGC TGGACCTGCT GGTGGTCAAT GAGATCGTCA TGAGCGAGAC GGCCCGGCTG GCCCATTACG TGCTGCCGGC CTGTACGTTT TACGAGTCCT GGGACACCAC GTTTTTTCCC ATGTCCTACC CGGAAGTCTA CCTGCAACTG CGGCGGCCTG TTGTATCGCC GCCCGGGGAA TGCAAAGAGC TGGCTGAAAT TTTTACCCTG ATCGCCGACC GGCTGGGCCT GATCCCGGAA ATCCCGGAGG CCCTGCACCA GGCCGCTGCC GAAGACAGCC TCACATTCGG GGCAAAGCTC ATGGAGTGGG CCATGACCGA GCCTTCGGCC CTTGCCGCCA TGCCCTTTGT GCTGGCCAAA ACCCTGGGCC GCCAGTGGAA AAGCGCTCAC AAGGCCGCCA TCTGGGGCAT GATGATGACC GCGCCCAAAG CCTTTTACAA AAACGCCATG CGGGCCGGGT TCGCGCCGGG CCCGGACCTG GGGGACCGCC TGTTTGCCGC CCTCCTGGAC AATCCCCAGG GCATCTGGGT GGGAAAGATT GACGACAGCA ATCCCATGGC CGTGTTAAAA ACCCCTTCCG GAAAAATCGA AGCCTTTATT CCCGAGCTGG AAGCAGACGT TAAGGCCCTG GACGCGGCTG CCGAGGCCGA AGCCTTGAAA ATGCCGGCGG ACTTTCCCCT GGTGCTCAAC GCCGGCCGGC ACATGAGATA CAACATCAAT ACCATGATGC GAAACCCGGA GTGGAACAAG GGGAAAAGGG CCTGCACCAT CGCCGTCAGC CCTTCGGATG CCGATAAACT GGGGTTTGCC GACGGCGAGA TCGTCCGGAT GGTCACCGAA GCGGGAGCCG AGCAGGGCGA ACTGGAGGTG TCAGACAGGG TCCGGCCGGG CATGGTGCTG ATCCCCCACG GGTTCGGCCT GAACTACAAC GGCAGCGTCT ACGGGCTCAA CGTGAACCGG CTTACCAAAA GCACCAACCG GGATCCCATA GGCACCCCGC TTCACCGGTT TGTGCCCTGC CGTCTGGAAA AGATAGAATA G
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Protein sequence | MEQWHKTGCV LCAQNCGLQV LVENNRMVKV KPDKDNPRSR GYACRKGLNV IYHQYPADRI TTPLKRVGAE FVPISWDQAA TEIAEKLRAT VNAHGPRSVA YMGASSQGGH MEAAFGLTIL RALGSQNFYS SAGQEFSGHW WVFGRMLGRQ YSVTGPDEHN CDMLVAWGWN GMESHQVPRA PIVLKEVADN PDKLLVAIDP RRSETAQIAN IHLALRPGTD ALLIKAMIAL ILAEGWEKRD YLLQHVEGWD AIRPWFENFD IRAAIAVCGL DYGEVLELCR LMATRQWGVH PDLGVFMGRR STLTSYLLMV LQLVCGRLLV PGGNIVPGMV MPMGFHADER DEKTWRTVAT HMPPAAAGAF PPSVLPEEIL TDHADRVRAV YVSACNPLRS YPDTTAYETA FKKLDLLVVN EIVMSETARL AHYVLPACTF YESWDTTFFP MSYPEVYLQL RRPVVSPPGE CKELAEIFTL IADRLGLIPE IPEALHQAAA EDSLTFGAKL MEWAMTEPSA LAAMPFVLAK TLGRQWKSAH KAAIWGMMMT APKAFYKNAM RAGFAPGPDL GDRLFAALLD NPQGIWVGKI DDSNPMAVLK TPSGKIEAFI PELEADVKAL DAAAEAEALK MPADFPLVLN AGRHMRYNIN TMMRNPEWNK GKRACTIAVS PSDADKLGFA DGEIVRMVTE AGAEQGELEV SDRVRPGMVL IPHGFGLNYN GSVYGLNVNR LTKSTNRDPI GTPLHRFVPC RLEKIE
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