| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1617 |
|---|
| Symbol | |
|---|
| ID | 5694454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1920338 |
|---|
| End bp | 1922380 |
|---|
| Gene Length | 2043 bp |
|---|
| Protein Length | 680 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641264212 |
|---|
| Product | translation elongation factor G |
|---|
| Protein accession | YP_001529498 |
|---|
| Protein GI | 158521628 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.109921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAC AGAAGACAAA AATCGAAAAC CTGCGCAACA TCGGCATCAT TGCCCATATC
GACGCCGGCA AGACCACGGT GACCGAGCGC ATTCTTTATT ATACCGGCCG CTCTTACAAG
ATGGGCGAGG TCCATGACGG CCAGGCCGTG ATGGACTGGA TGGTTGACGA GCAGGAGCGG
GGCATCACCA TCACTTCGGC GGTGACCACC TGCCAGTGGA AAAACACGGA GATCCAGCTT
ATCGATACGC CGGGCCACGT GGATTTCACC ATTGAGGTGG AACGGTCCCT GCGGGTGCTG
GACGGCGCCG TGGGCGTGTT CTGCGCCGTG GGCGGAGTGG AGCCCCAGTC GGAAAAGGTG
TGGCGCCAGG CCGACAAGTA CCGGGTACCC AAGATCGCCT TTGTCAACAA GATGGATCGT
ATCGGCGCCG ATTTTTTCGG CACCGTGGAC ATGATCCGGG AAAAGCTCAA GGCCCGGCCC
GTGCTGCTTC AGATTCCCGT CGGCAGAGAG GAGACCTTTA CCGGCGTCAT TGACCTGGTG
GAGATGAAAC AGATCGTATG GGACGACGAG ACCCTGGGGG CCCGCTTTGA GATCACCGAT
ATCGAGGATG CCTACCGGGA GGATGCCGAG CTCTACCGGG ACCGGCTGAT GGAATCCCTC
GCCGACGTGG ACGACACCAT CATGGAGGCC TACCTCGCCG AAACACCGGT GGAAACCGCT
GATATCGTGA AGGCAATCCG CGGCGCCGTG AACCGCCTGG CCCTGGTGCC GGTGCTGTGC
GGCAGCGCGT TGAAGAACAA GGGGGTCCAG CCCCTGCTGG ACGCGGTTGC CCTTTACCTG
CCCAGCCCCA AAGATGTGCC GCCCATCGAA GGCATCCACC CGGATACCGG CGACGTGATC
CGGTGCGAAC CCAAAGCCTC CGGCCCACTG GCGGCCCTGA TTTTCAAGGT CTCCATCATC
GAGGGCCGCA AGCTCTCTTT TGCCCGTGTT TACAGCGGCA GGCTGATGGC CGGAGAAGAG
GTGTACAACC CCCTGCGCAA GCAGAAGGAA AAGATCTCCC GCATTCTGAA GATGCACGCC
AACAAGCGGG AGCGCGTCGA AGAAGTCGGG CCTGGCGCCA TTGTTGGCGT GGTGGGGCTC
AAGGACGCCT CCACCGGTGA AACCCTCTGC CGGGCCAGCG CGCCCGTGGC CCTGGAAAGG
ATGGAGTTCG AGGAGCCGGT GATTTCCATT GCCGTGGAAC CCAAGACCCA TGCCGACCAG
GAAAAGATGA CCGAGGTGCT GTCCAAGTTC TCCGCTGAAG ACCCCACCCT TCGCGTGCGC
ATCGACGAGG ATACCGGCCA GACCATTCTT TCGGGTATGG GCGAGCTGCA CCTGGAGATC
ATTGTCAGCC GCATGACGCG GGAGTTCAAC ACACGGGTCA ACGTGGGCCG TCCCCAGGTG
GTCTACCGGG AGACCATCGG CAAAGAGAGC GCCGGCACCG TGGTGTTCGA CCGAGAGATC
GCCGGCCAGC GCCATTTCGC GGAAGTCTCC CTTGTTTTAA GGCCGCTGAA AAGAGGGTCG
GGCAATGTGT TTAAAAACAG CCTGGCCCCG GAGGCCATTC CGCCCCAGTT TCTGCCGGAC
ATTGAAAGGG GTGTCACGGA GTCTTTTGAG AGCGGGTCCT TCATGGGTTA CCCGGTCATC
GACGTGGAAG CCGAGGTAAC GGGCGCATCC TTTAAAGAGG GGATGAGCAC CAGCCTGGGA
TTCGGCGTGT GCGCCTCCAT GGCCTGCAAG GAGGCCTTTT CAAAGGGCGG GCCGTTTCTC
CTGGAGCCCA TTATGAATGT GGACGTGTTT GTGCCGGACG ACTATATCGG TGACGTCATC
GGTGATCTTA ACGCCCGCGG CGGCAAGATT GAGGCCATGG CGGTCAAGGC CGGCATGCAG
GAGATCAAGG CCACGGCCCC GCTGTCGCGC ATGTTCGGTT ACTCCACGGC CCTGCGCTCG
GCCACCCAGG GCAAGGGCAC CTTCTCCATG CAGTTTTCCC ATTTCGACAG CCCCGGCAAG
TAA
|
|---|
| Protein sequence | MNTQKTKIEN LRNIGIIAHI DAGKTTVTER ILYYTGRSYK MGEVHDGQAV MDWMVDEQER
GITITSAVTT CQWKNTEIQL IDTPGHVDFT IEVERSLRVL DGAVGVFCAV GGVEPQSEKV
WRQADKYRVP KIAFVNKMDR IGADFFGTVD MIREKLKARP VLLQIPVGRE ETFTGVIDLV
EMKQIVWDDE TLGARFEITD IEDAYREDAE LYRDRLMESL ADVDDTIMEA YLAETPVETA
DIVKAIRGAV NRLALVPVLC GSALKNKGVQ PLLDAVALYL PSPKDVPPIE GIHPDTGDVI
RCEPKASGPL AALIFKVSII EGRKLSFARV YSGRLMAGEE VYNPLRKQKE KISRILKMHA
NKRERVEEVG PGAIVGVVGL KDASTGETLC RASAPVALER MEFEEPVISI AVEPKTHADQ
EKMTEVLSKF SAEDPTLRVR IDEDTGQTIL SGMGELHLEI IVSRMTREFN TRVNVGRPQV
VYRETIGKES AGTVVFDREI AGQRHFAEVS LVLRPLKRGS GNVFKNSLAP EAIPPQFLPD
IERGVTESFE SGSFMGYPVI DVEAEVTGAS FKEGMSTSLG FGVCASMACK EAFSKGGPFL
LEPIMNVDVF VPDDYIGDVI GDLNARGGKI EAMAVKAGMQ EIKATAPLSR MFGYSTALRS
ATQGKGTFSM QFSHFDSPGK
|
|---|
| |