Gene Dole_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1608 
Symbol 
ID5694445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1911691 
End bp1912518 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content57% 
IMG OID641264203 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001529489 
Protein GI158521619 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTAT CGGGTAAAAC AGCGTTGGTG ACAGGGGCCT CAAGAGGTCT GGGCGGGGCC 
ATTGCGTTGG CCCTGGGTGC GGCCGGCGCC AATGTCGCGG TCACGGATCT GCTGGTGGAA
TCGGAGCTCC CCGACAAAGA ACAACTGGGC CGATACAGTG TTCTGGCCGC CCATTTTGCC
GGAAGTGAAA ACGTCCGGAC GGTTTCAACC GCCGCGGAAA TAAAAACGAT GGGTCGTAAA
AGTCTGGCCA TGAAAATGGA TGTGACAAAC CCGGATCAGG TTCAAATGGT CGTGGCGGAG
ATTGCCGCTG AGCTGGGAGA GGTGGATATC CTGGTGAATA ATGCCGGGGT CATGGACAAC
ATGGCCGCCC TGGAACACCA GAATCTGACG ATGTTTGAAC GGGACCTGAA GGTCAATCTG
ACCGGCGCGT TCAACTGTAT TCAGGCGGTC TGGCCGTATA TGAAGAAAAG CGGGTGGGGC
CGGATTATCA ATATTTCCTC TTTTGTCGCC GTAAGCGGCG CTTTTGCCCA GCCGGGTTAT
GGCGCTTCCA AGGCCGGTAT GATCGGTCTG ACCCGATCCC TGGCCCTGGA AGGGGCCGGG
CATGGCATAA CCGTCAACGC GGTTCTTCCC GGTTTTATCG AAACAGAAGC CGTTCAGTTG
CATGATCCCA AAATGCTCGA CCGGATCAGG GCGCGGACCC CCATGAAGCG CCTGGGCAAA
CCAAAAGAAA TCTCGCCCCT GGTCGTTTTT CTGGCCGGTG AAGACGCCGG TTTCATCACC
GGCGCCGCCA TACCGGTCAC CGGCGGTGCG GATATGTTTG TGTTCTAA
 
Protein sequence
MTLSGKTALV TGASRGLGGA IALALGAAGA NVAVTDLLVE SELPDKEQLG RYSVLAAHFA 
GSENVRTVST AAEIKTMGRK SLAMKMDVTN PDQVQMVVAE IAAELGEVDI LVNNAGVMDN
MAALEHQNLT MFERDLKVNL TGAFNCIQAV WPYMKKSGWG RIINISSFVA VSGAFAQPGY
GASKAGMIGL TRSLALEGAG HGITVNAVLP GFIETEAVQL HDPKMLDRIR ARTPMKRLGK
PKEISPLVVF LAGEDAGFIT GAAIPVTGGA DMFVF