Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1608 |
Symbol | |
ID | 5694445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1911691 |
End bp | 1912518 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641264203 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001529489 |
Protein GI | 158521619 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTAT CGGGTAAAAC AGCGTTGGTG ACAGGGGCCT CAAGAGGTCT GGGCGGGGCC ATTGCGTTGG CCCTGGGTGC GGCCGGCGCC AATGTCGCGG TCACGGATCT GCTGGTGGAA TCGGAGCTCC CCGACAAAGA ACAACTGGGC CGATACAGTG TTCTGGCCGC CCATTTTGCC GGAAGTGAAA ACGTCCGGAC GGTTTCAACC GCCGCGGAAA TAAAAACGAT GGGTCGTAAA AGTCTGGCCA TGAAAATGGA TGTGACAAAC CCGGATCAGG TTCAAATGGT CGTGGCGGAG ATTGCCGCTG AGCTGGGAGA GGTGGATATC CTGGTGAATA ATGCCGGGGT CATGGACAAC ATGGCCGCCC TGGAACACCA GAATCTGACG ATGTTTGAAC GGGACCTGAA GGTCAATCTG ACCGGCGCGT TCAACTGTAT TCAGGCGGTC TGGCCGTATA TGAAGAAAAG CGGGTGGGGC CGGATTATCA ATATTTCCTC TTTTGTCGCC GTAAGCGGCG CTTTTGCCCA GCCGGGTTAT GGCGCTTCCA AGGCCGGTAT GATCGGTCTG ACCCGATCCC TGGCCCTGGA AGGGGCCGGG CATGGCATAA CCGTCAACGC GGTTCTTCCC GGTTTTATCG AAACAGAAGC CGTTCAGTTG CATGATCCCA AAATGCTCGA CCGGATCAGG GCGCGGACCC CCATGAAGCG CCTGGGCAAA CCAAAAGAAA TCTCGCCCCT GGTCGTTTTT CTGGCCGGTG AAGACGCCGG TTTCATCACC GGCGCCGCCA TACCGGTCAC CGGCGGTGCG GATATGTTTG TGTTCTAA
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Protein sequence | MTLSGKTALV TGASRGLGGA IALALGAAGA NVAVTDLLVE SELPDKEQLG RYSVLAAHFA GSENVRTVST AAEIKTMGRK SLAMKMDVTN PDQVQMVVAE IAAELGEVDI LVNNAGVMDN MAALEHQNLT MFERDLKVNL TGAFNCIQAV WPYMKKSGWG RIINISSFVA VSGAFAQPGY GASKAGMIGL TRSLALEGAG HGITVNAVLP GFIETEAVQL HDPKMLDRIR ARTPMKRLGK PKEISPLVVF LAGEDAGFIT GAAIPVTGGA DMFVF
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