Gene Dole_1604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1604 
Symbol 
ID5694441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1906346 
End bp1907509 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content55% 
IMG OID641264199 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001529485 
Protein GI158521615 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTTTG GATTCACCCG GGAGCAGGAA ATGCTCAAAA AAGAGACCCA GCGCTTCTGC 
AAAAAAGAGC TCTCTTTGGA TTACGTGCAA TGGATGGATG AAAATGTTGA TTTCCCGCCG
GATGAGCTGT GGCAGAAGTT TAACGACCTG GGCGCCTTTC GAATGAATGT TCCGACGGAA
TATGGCGGTG ACAGTGTCAG CATGGTGGAC GGCATGCTTC TTTATGAAGA AATATGCAAA
GCCTCCACTT CAGTGGCCCT GGCCATCGGC ACCACCATCG GCTTCGGCAC CCGGTTTATT
GCCGAACTCG GCTCCACATC ACAGAAGGAA GAATTGCTGC CGAAGATATG CGAGGGCAAG
CTGAGATTCT GCATGGCCCT GACCGAACCC GGCGGCGGCA CGGACATCCT CGGCGCCGTC
CAGACCTGCG CCGAGGAAAA AGAAGACCGC TGGGTGTTAA ACGGCGAAAA GGTCTTTATC
ACCGGCGCTC ATGTGGCCGA CTATTTCATC ACCATCTGCC GCACGGACCC GGACAACAAG
CCCAGCAAAT CACTGAGCAC TTTCCTGGTG CCGGCAAACG CCAAGGGGAT TTCCATCACC
CGCATCCCGA AAATCAGCTG CCACCATTGC GATTCAGTGG GTATTTCATT TAACAACGTG
GAAATCCCCA AAGAGAACAT CCTGGGCACT CGCGGCAATG GATGGTTTGA AATGCTGACC
GTACTCAACC CCGAACGCAT CGGCGTGGCC ATGATGGGGG TGGGGTTGAT CGCGGCCGCT
TACGAATACG CCTTTGACTA TGCCCGGAAA CGGCAGGCCT TTGGCGGCCC CATCAGCCGG
TTCCAGAGCC TGCAGCATTA CCTGGCGGAC ATGTACATCA ACCTGGAGAA TTCCCGGAAC
ATCACTTATA AGTCGGCCTG GCTGTGTGAT AACGGTCAGC CCTATCACAT GGAGGCCACC
ATGGCCAAAG TCATCGCCGC CGACGGCGCT CTGCACGCCA CCATCAAGGG CGCGGAAATC
CTGGGCGGTT ACGGCATCTG CAATGAATAT CCCATGCAGC GTTTTCTTCG GGACGCGTTC
CAGCTCCAGT TTTCACCCAT CTCCAATGAA ATGAGCCGCA ACATGATCAT GCAGTTTCAG
GGGTTCCCGA AATCGTGGCC ATAA
 
Protein sequence
MDFGFTREQE MLKKETQRFC KKELSLDYVQ WMDENVDFPP DELWQKFNDL GAFRMNVPTE 
YGGDSVSMVD GMLLYEEICK ASTSVALAIG TTIGFGTRFI AELGSTSQKE ELLPKICEGK
LRFCMALTEP GGGTDILGAV QTCAEEKEDR WVLNGEKVFI TGAHVADYFI TICRTDPDNK
PSKSLSTFLV PANAKGISIT RIPKISCHHC DSVGISFNNV EIPKENILGT RGNGWFEMLT
VLNPERIGVA MMGVGLIAAA YEYAFDYARK RQAFGGPISR FQSLQHYLAD MYINLENSRN
ITYKSAWLCD NGQPYHMEAT MAKVIAADGA LHATIKGAEI LGGYGICNEY PMQRFLRDAF
QLQFSPISNE MSRNMIMQFQ GFPKSWP