Gene Dole_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1602 
Symbol 
ID5694439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1905124 
End bp1905555 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content49% 
IMG OID641264197 
Producthypothetical protein 
Protein accessionYP_001529483 
Protein GI158521613 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATTC AGAACATCCA GTTTGATATG ACACGGCCGT TACCGGAAAC ACAACCCTGG 
TCAAAACCTT TCTGGGAAGG CGCAAAACAG GGCAAGCTTC TGATTCAGCA CTGCAAGGAC
TGCAATGCCA ATATCTTTTA CCCGCGCAAG GTCTGCCCGG AATGCTGGTC GAAAAACATG
GACTGGATTA CGGCCAGCGG CAAAGCCAAA GTCTATATGT TCTCCACGGC CTACGACATG
GTGGAGCCGA AGTTCATGGC GGACCTGCCC TACACGGTGG CTTATGTGAA TCTGGAAGAA
GGCATCCGCA TGATGACGCG GATCGTGGAA TGCGATCCGG CGGACATCCA CATTGATATG
GAAGTGGAAG TGGTTTTCCA CAAATTAAAC GACGATTTCT ATCTTCCGTA CTTTAAGCCC
GTAAAAAAAT AG
 
Protein sequence
MDIQNIQFDM TRPLPETQPW SKPFWEGAKQ GKLLIQHCKD CNANIFYPRK VCPECWSKNM 
DWITASGKAK VYMFSTAYDM VEPKFMADLP YTVAYVNLEE GIRMMTRIVE CDPADIHIDM
EVEVVFHKLN DDFYLPYFKP VKK