Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1590 |
Symbol | |
ID | 5694427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1892435 |
End bp | 1893298 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641264185 |
Product | nitroreductase |
Protein accession | YP_001529471 |
Protein GI | 158521601 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000230699 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATTG AACGATTAAC GGACCGGTGC AATAACTGCA TGCTGTGTGT TGAAGAGTGC ATTGCCGGTG TGTGGCGCGA GGTCAACGGC GTGCCCGAGC CGGTGTTTCC CCTGGCGTGC AACCTGTGCA GCCACTGTGT GGCGGTTTGT CCCCGGCAGG CCATTGTTCA CTCCCGCCTG GACCAGGGCC AGGTGGACAG GGTGCGACGA AAGCTTTTGG ACGCGGAAAC CTACAGGGAG ATCACGGTCA CTCGGCGCAG CATCCGGCGC TACAAGGATT TGCCGGTGCC CCGCCAGGCC ATCGAGAAGG TGCTTGATCT GGCCCGGTTC TCCCCCACGG CCAGCAACTC TCAGCACCTG AGCTATATCG TGATCACCGA TCGCGCGATC ATTCAAAAGG CCGCGGACCG TGTGTTTGCC ATGGGTGTCA AAGCCTACCG ATGGGCCACC TCCCGGCCCG GGAAAATGGT TCTCGGACTG TTGAAAAAGA ACAAAAAAAT AGCTTCGCTG CAGCGCTATA TGGCTGCCAT GGATTATTAC ATCGAACAGT CCGCCGCGGG CCGGGACTAT ATTCTTCACA ACGCGCCGGT GCTTATCCTT GTGTGCGCGC CCAGGGGGGC AGATTTTGCC GTGGACAACT GCAACATCGC GGGTACCAAT ATCATCAACT ATGCCCACAC GCTTGGCCTT GGCACCTGCT ATATCGGTTT TCTCACCCTG CTGCTGCGGC GCGGTAAAAA GCTTCGTGCC CTGCTGCGGG TTCCCGAGAA CCGGCAGGTG GGGGTCAGTC TGGTCATGGG ATACCCGGCC TATCGCCATT CGTTTGCGCC GGCTCGAAAA AACCCTTGCG TAACATGGGT TTAG
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Protein sequence | MRIERLTDRC NNCMLCVEEC IAGVWREVNG VPEPVFPLAC NLCSHCVAVC PRQAIVHSRL DQGQVDRVRR KLLDAETYRE ITVTRRSIRR YKDLPVPRQA IEKVLDLARF SPTASNSQHL SYIVITDRAI IQKAADRVFA MGVKAYRWAT SRPGKMVLGL LKKNKKIASL QRYMAAMDYY IEQSAAGRDY ILHNAPVLIL VCAPRGADFA VDNCNIAGTN IINYAHTLGL GTCYIGFLTL LLRRGKKLRA LLRVPENRQV GVSLVMGYPA YRHSFAPARK NPCVTWV
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