| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1571 |
|---|
| Symbol | |
|---|
| ID | 5694408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1870400 |
|---|
| End bp | 1871578 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641264166 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001529452 |
|---|
| Protein GI | 158521582 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0206923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCACC CATACACCAT CATTGATACC GCTGTTGTGC GGGTGGGCAG TCTGATCGAC
GGCACGGGTA GACCTGCGCG AAAAGATCTG TTTGTGCGGG TGGAAAAGGG AATGGTTCAG
GCCATAACGG ATACGGTGCC GTCCGGACCG CATGATCTGA TCGACCTGTC CGGCTGCACC
GTGCTGCCCT GCCTGATCGA CAGCCATGTT CACCTTTTTC TGTCCGGCAG CCTGGATTCG
GAAGAACACC GTCGGCAGAT GGCCGCCGGA TTTGAGGATG CGTGCCGGAC CATAGCGGAA
AATATCGATT GCCAGCAGTC CTGCGGCGTG CTGACCGTGC GCGACGGCGG TGATGGCCGG
GCCCATGTGT CGCGTTTTTT GCGGGATAGA GTTGAAAAGG GGCACAGCCT TTTTCTTGCG
CAGACCCCTA GCAGGGGATG GTTCAAGGCG GGCCGTTACG GAAAACTGGT GGGCGGCGAG
CCCCTGCCGG AAAGCGCTTT TCTGGAAGCC ATCACCGGGC AGATGGCCGC CGGTGCTGAT
CATGTCAAGC TGGTCAACTC GGGATTAAAC AGCCTGACCC GATTCGGTGT GCAGACGACG
CCGCAGTTTA CACCGGACGA GCTTGCCGCC ATTGTGGCAT TGGCCCACGG GGCCGGGCGG
CCGGTGATGG TCCATGCCAA TGGCGAAATT CCTGTTCGTC AGGCCGTGGA GGCCGGAGTA
GATTCCATTG AGCACGGGTA TTTCATGGGG ACCGATAACC TGTTACGAAT GGCCGAACGG
CAGACCTTCT GGGTGCCCAC CCTGGCGCCC ATGCATGCTT TTGCCCAGAC CACCGTTGAT
TTCAGCGGCG TGGCGGCCCG CACGCTTGAG CACCAGATGG GGCAGCTTGC CTTTGCCCGC
CGGGTCGGGG TAAAGGTGGC CCTGGGCACG GATGCCGGCA GCCCCGGCGT TTATCACGGC
ACGGGTGTGA TTCGCGAGCT TGAACTTTTT ATGGCCGCTG GCTACACCAT GGAAGAGGCC
GTTGGCTGTG CCGCGGTTTG CAATGCCGAC CTGCTCGGCC TGGCCGACCG TGGAAGAATC
GCACCGGACA TGCCGGCGCT GTGGGCCGTT GTGTCGGGAG ATGCAGGTAG GCTTCCCGCC
AGTCTGGCCC AGGCGGTTGT GTATGCGGGG AAGGGTTGA
|
|---|
| Protein sequence | MNHPYTIIDT AVVRVGSLID GTGRPARKDL FVRVEKGMVQ AITDTVPSGP HDLIDLSGCT
VLPCLIDSHV HLFLSGSLDS EEHRRQMAAG FEDACRTIAE NIDCQQSCGV LTVRDGGDGR
AHVSRFLRDR VEKGHSLFLA QTPSRGWFKA GRYGKLVGGE PLPESAFLEA ITGQMAAGAD
HVKLVNSGLN SLTRFGVQTT PQFTPDELAA IVALAHGAGR PVMVHANGEI PVRQAVEAGV
DSIEHGYFMG TDNLLRMAER QTFWVPTLAP MHAFAQTTVD FSGVAARTLE HQMGQLAFAR
RVGVKVALGT DAGSPGVYHG TGVIRELELF MAAGYTMEEA VGCAAVCNAD LLGLADRGRI
APDMPALWAV VSGDAGRLPA SLAQAVVYAG KG
|
|---|
| |