| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1561 |
|---|
| Symbol | |
|---|
| ID | 5694398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1860062 |
|---|
| End bp | 1860799 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641264156 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_001529442 |
|---|
| Protein GI | 158521572 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0396] ABC-type transport system involved in Fe-S cluster assembly, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGAGC TCAAGGACAT CACCCTGCGT CTGGACGATG GCCGTGCGGT ACTGGACGGC
GTCAGCGTCA CATTGCAGAA CAGAAAAATT TATGCTGTTA CAGGCCCGAA CGGCAGCGGC
AAGTCGTCGC TGGCCCGTAT CATTATGGGG CTGCAGCAGC CCACGGCGGG ACGGATACTG
CTTGACGGGC AGGATATTAC GGATATGGAC ATCACCCAGC GGGCCGGGCT CGGCATCGGC
TATGCCTTTC AGCACCCGCC CCGTTTCAAG GGCATCAAGG TGCGGGAGCT GATCAAGCTC
GCCGACGGCA GCAGAAACAA GGCGGGCATC TGTGACATGC TTTACAGCGT GGGGCTGTGC
GCGCAGGAGT ACCTGGAGCG GGATGCCGAC GCCACCCTTT CGGGCGGTGA GGCCAAGCGT
ATCGAAATCG CGACGGTGCT GGCCCGCCGC CTGAGGCTTG CGGTGTTCGA TGAGCCGGAA
GCGGGCATCG ACCTGTGGAG TTTTCAGAAG CTGGCCGATA CGTTCCGCGA GATGCACGGG
AAATCCGACA CCACCATCGT GATCATATCC CATCAGGAGC GCATTCTGGA GCTGGCCGAT
GATATACTGC TCATAAAGGA GGGGCGTCTC GCTCCCGTGC CGCGTGACAT AATCCTCACG
TCCAATAATT CAGAAGCGAA CTGCCGCTGC CGGCAAAGCT GCGGAAAGAG AGGAGAGGCT
CATGTTGAGT GCGCTTGA
|
|---|
| Protein sequence | MLELKDITLR LDDGRAVLDG VSVTLQNRKI YAVTGPNGSG KSSLARIIMG LQQPTAGRIL
LDGQDITDMD ITQRAGLGIG YAFQHPPRFK GIKVRELIKL ADGSRNKAGI CDMLYSVGLC
AQEYLERDAD ATLSGGEAKR IEIATVLARR LRLAVFDEPE AGIDLWSFQK LADTFREMHG
KSDTTIVIIS HQERILELAD DILLIKEGRL APVPRDIILT SNNSEANCRC RQSCGKRGEA
HVECA
|
|---|
| |