Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1520 |
Symbol | |
ID | 5694357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1813134 |
End bp | 1815467 |
Gene Length | 2334 bp |
Protein Length | 777 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641264115 |
Product | PAS/PAC sensor hybrid histidine kinase |
Protein accession | YP_001529401 |
Protein GI | 158521531 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGACG ACAGACAGGC CACCGGGGCA ATAAAGGACT ACGTCTATAC GGTCATCATT GAAAACGGCG TGGCCGTGGC GACAAAACAG GGGCCCGGCT GTGAGGCGGT AACAGGCTTT GGCGCCGATG CCTTTGAAAA AGACCCTGAA CTCTGGCTGA GCCGTATACC GGACGAGGAC CGCGACCGCG TCACCGGAAT GATCAATCTT GCCGCCGCCG GCAGGGATGC GGTCTCCGTC GAGCACCGGT TCGTCCATCA GGACGGGCGC ACGCGCTGGC TAAGAAACAC GCCGGTCCTC CACTGGGAGG GGCCCGGCCC CCGTTCGCGG TGTCTGAGCC TGATTCAGGA CATTACCGAG CACAGAGAGG CCGATGCGGC CCTTCGGGAG AGCCGGACCA TGCTCAACCG GGTGATCGAC ACCGTGCCCC AGTCCATCTT CTGGAAAGAT ACAAAAGGTC GTTACCTGGG CTGCAACAGG GCCTTTGCAA AGGCCGCCGG TCTTGACCAC CCCCGTCAGA TCGTGGGCAA GACCGATTTT GAGCTGCCAT GGCCCAGGGA GACGGCAGAA AGCTACCGCG CATCCGACCG GGAGGTGCTG GAAAGCAACA GTCCACGCCT TCATGTGGTT GAACCGATGC AGCAGGCGGA TGGCGAACGC CTGTGGGTCA ACGTGTCAAA AGTACCCCTG GTGGATGAAA CCGGTCTCCC TTTTGCCGTG CTGGGCATCT ACGAGGACAT CACCGAACGC AAGCAGATGG AAGATGAGCT GCTGCGGGAA AAAACCTTTA TCGAGGCCAT TTTCAACAGT GCACCGGGCA TGCTGTATCT GTATGACACC AATGAGCGGC TGGTCCGGTG GAACAAAAAA CATGAAACGA TGTCGGGCTA CACTTCCGAC GAGTTAAACG GCATGCATAT CCTCAAGTGG TTCGAAAATG ATGAAAAAAG CATCAAGGCC ATACTTGAGG GAGTTCAGGC AACCATGGAA AAGGGCTCCG GAGAGGCCGA GGCCGACCTG CAGAAAAAGG ACGGCACCAC CATTCCCATG TATTTCACGG GCAGTCGATT AACCATTGAC GACCAGCCCT ACCTCACCGG CATCGGCATC GACATCACCG AACGCCGGCG GGCCGCGGAA GAAAAGGAAA AACTTCAGGC CCAGCTGCTT CAGGCCCAGA AAATCGAATC CGTGGGAAGG CTGGCCGGCG GCGTGGCCCA CGATTTTAAT AACATGCTCA ATGTTATTCT GGGCCACGCG GCCCTGGCAT TAAGTACCCT GGCCGATGAC GATCTCATGC GCGGCCACCT GGAACAGATT CAAAAGGCCG CGGACCGGTC CGCCGGCCTA ACGCGCCAGC TTCTGGCCTT TGCCCGTAAA CAGACTGTGG CGCCAAAGGT TCTTGAACTG AATGCCACCG TGGCCAGCAT GCTGGAGATG CTGCTGCGGC TTATCGGTGA AGACATTGAC CTGGCCTGGC ATCCGGGCGC ACATCCAATG CTGATAAAAA TGGACCCCTC CCAGGTCGAC CAGATTCTGG CCAACCTGTG CGTCAACGCC AGGGACGCCA TTGAAGGCAC GGGAAAAATC ACCATTGAAA CCGGTACCGC GGATTTTGAT GAGGCCTACT GCGCTGAACA CCCGGACTGC ATACCCGGCG CCTATGCCCT GCTGGCCATC AGCGACAACG GTGCCGGCAT GGATCCCGAA ACCATATCCC ACCTGTTCGA GCCCTTTTTC ACCACCAAGG AGATGGGCAA AGGCAGCGGC CTGGGCCTGG CCACGATCTA TGGCATTGTC AGGCAGAACA ATGGATTTAT CAACGTATAC AGCGAACCGG GCACAGGAAC AACCTTCAAG GTCTACCTGC TCCGGCATAC AGACGAAGGG ATGGCACCGG CACCGGTCAA AAAGGTCTTT GCGCCCCTTG CCCGGGGCCA CGAAACCATC CTGCTGGTGG AAGACGAAGC CCTGCTGCTG GACATGACCG CGACCATGCT CAGGCTCCAG GGCTACACGG TTCTGGCGGC TTCCACCCCG GGAGAGGCCA TGCGCCTGGC CAGGGAGCAT GCCGGCGACA TTCACCTGCT GATGACCGAC GTGGTCATGC CTGAAATGAA CGGCCGGGAC CTGGCCACCA GAGCGCTGTC CCTGCGGCCC GGAATCAGGC TTCTGTTCAT GTCCGGCTAC ACGGCCAATG TCATTGCCCA CCACGGCGTG CTGGACGACG GCGTTCACTT TCTTCAGAAA CCCTTTTCAG CCAAAGAGCT GGCCGCCAGA GTGCGGGAGG CACTGGATGA AAACGACGGG GGCACACCAC CGGCGATCGA TTAA
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Protein sequence | MNDDRQATGA IKDYVYTVII ENGVAVATKQ GPGCEAVTGF GADAFEKDPE LWLSRIPDED RDRVTGMINL AAAGRDAVSV EHRFVHQDGR TRWLRNTPVL HWEGPGPRSR CLSLIQDITE HREADAALRE SRTMLNRVID TVPQSIFWKD TKGRYLGCNR AFAKAAGLDH PRQIVGKTDF ELPWPRETAE SYRASDREVL ESNSPRLHVV EPMQQADGER LWVNVSKVPL VDETGLPFAV LGIYEDITER KQMEDELLRE KTFIEAIFNS APGMLYLYDT NERLVRWNKK HETMSGYTSD ELNGMHILKW FENDEKSIKA ILEGVQATME KGSGEAEADL QKKDGTTIPM YFTGSRLTID DQPYLTGIGI DITERRRAAE EKEKLQAQLL QAQKIESVGR LAGGVAHDFN NMLNVILGHA ALALSTLADD DLMRGHLEQI QKAADRSAGL TRQLLAFARK QTVAPKVLEL NATVASMLEM LLRLIGEDID LAWHPGAHPM LIKMDPSQVD QILANLCVNA RDAIEGTGKI TIETGTADFD EAYCAEHPDC IPGAYALLAI SDNGAGMDPE TISHLFEPFF TTKEMGKGSG LGLATIYGIV RQNNGFINVY SEPGTGTTFK VYLLRHTDEG MAPAPVKKVF APLARGHETI LLVEDEALLL DMTATMLRLQ GYTVLAASTP GEAMRLAREH AGDIHLLMTD VVMPEMNGRD LATRALSLRP GIRLLFMSGY TANVIAHHGV LDDGVHFLQK PFSAKELAAR VREALDENDG GTPPAID
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