| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1506 |
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| Symbol | |
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| ID | 5694343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1796092 |
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| End bp | 1796931 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641264101 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001529387 |
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| Protein GI | 158521517 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00711463 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAATTA AAACCTTTTC CGGAAAACGG GCTTATGTTT TTGGTGGGTC GTCCGGCATC
GGCCTGGCTG CTGCCCGGCA GCTGGCCGGC ATGGGGGCTG ACCTTGCGCT TTTTGCCAGG
GACGGCAACA GACTGGAAAC GGCCGGACAG GAGGTGCGGC ATGCCGCAAC CGGCCCGTCA
CTGCAGGTCC ATGTTTTTCC CGTGGATGTG TCGGACCGGG ACCGGGTTTT TGAAGCCGTG
GCAAATGCGG TGGATGTCCT GGGGCCGCCG GATATGCTGA TCAACTGCGC CGGCCGGGCC
ATTCCCCGCT GCTTTGCCGA CATCGGCGAG GACCAGCTTT CCCAGACCCT GGCCATCAAC
CTGTGCGGCA CCTGGCACAC CATAGCCGCG GCCCTTCCTT ATATGAGGGG GCGGGGCGGC
CATATCGTCA ATGTCTCTTC CATCGCCGGT TTTCTGGGCG TGTACGGATA TGCGGATTAT
GCGGCATCCA AGTTTGCCGT CATGGGGCTC TCCGAGGTGC TGCGCAGCGA GTTTAAGCCT
CTGGGCATCG GCGTGTCCGT GCTCTGCCCC CCGGATACCG ACACCCCGGC CCTGGCCGCT
GAAGCCGCCA CAAAGCCGGA AGAGACAAAG GCCATTTCCG CGGGTGCCAG AGTGCTTTCC
GCCGATGCCG TGGCAAAGGC CATGATTCGG GGAATGAAAA AAAACCGGGC CATGATTGTG
CCGGGTTTTG ACGGCCGGCT GATCTGGCTG GCCAAACGGC TGTTTCCGGG CCTGGTCTCT
TTTTTCATGG ACCGGACCAT TCGCCGGACC CGGTGCGGGA AGATATCTAC CGCCTCTTAA
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| Protein sequence | MGIKTFSGKR AYVFGGSSGI GLAAARQLAG MGADLALFAR DGNRLETAGQ EVRHAATGPS
LQVHVFPVDV SDRDRVFEAV ANAVDVLGPP DMLINCAGRA IPRCFADIGE DQLSQTLAIN
LCGTWHTIAA ALPYMRGRGG HIVNVSSIAG FLGVYGYADY AASKFAVMGL SEVLRSEFKP
LGIGVSVLCP PDTDTPALAA EAATKPEETK AISAGARVLS ADAVAKAMIR GMKKNRAMIV
PGFDGRLIWL AKRLFPGLVS FFMDRTIRRT RCGKISTAS
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