Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1502 |
Symbol | rnc |
ID | 5694339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1793165 |
End bp | 1793860 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641264097 |
Product | ribonuclease III |
Protein accession | YP_001529383 |
Protein GI | 158521513 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00547993 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACCA CACTGCTCGA ACAACACCTG GTGTACCGGT TCACCGACAC CGGCCTGCTG GCAAAGGCCC TTCGGCACAG CTCCTATGTG AATGAACAGG CCGACCCCGC CATGGAGGAC AACGAGCGCC TTGAATTTCT CGGAGACGCT GCCCTCTCCC TGTGCATCGG CCACCTGCTG ATGGCCCGGT TTCCCGAGCT CTCCGAGGGG GACCTCTCCC AGACACGGGC CGGTCTGGTC AATGCCGGCT GGCTGGCGGA TATCGGCCGT TCCATGAACC TGGGGGAATA TGTTCTGCTG GGCAAAGGAG AAGAGCAGAC CAATGGCCGG AACAAGGACT CCATTCTGGC CAACGCGGTT GAGGCACTGC TGGGCGCCAT TTATCTGGAC GGCGGTTTTG ACGCGGTGAT GGCCGTGGTG CGGCACAAGT TTGAAAACGA TATCGAGGCC CTGGCGGCCC TGGACATGAA CCGGAACTAC AAGAGCCTGC TTCAGGAGCT GACCCAGGCC ACTGACGGCA AGGCCCCGAC TTATGAAATC ATTGACGAAA CCGGGCCGGA CCACGACAAG ACCTTCCACT GCCGGGTTTC CGCCGGCGAC ATTCAGGCCG AAGGATCCGG GAAAAACAAA AAAACGGCCC AGCAGGATGC GGCCCACAAG GCCCTGGCCC TGATCAAAGG GGAACCCCTC CCATGA
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Protein sequence | MNTTLLEQHL VYRFTDTGLL AKALRHSSYV NEQADPAMED NERLEFLGDA ALSLCIGHLL MARFPELSEG DLSQTRAGLV NAGWLADIGR SMNLGEYVLL GKGEEQTNGR NKDSILANAV EALLGAIYLD GGFDAVMAVV RHKFENDIEA LAALDMNRNY KSLLQELTQA TDGKAPTYEI IDETGPDHDK TFHCRVSAGD IQAEGSGKNK KTAQQDAAHK ALALIKGEPL P
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