Gene Dole_1485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1485 
Symbol 
ID5694322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1773194 
End bp1774807 
Gene Length1614 bp 
Protein Length537 aa 
Translation table11 
GC content61% 
IMG OID641264080 
Productiron-sulfur cluster binding protein 
Protein accessionYP_001529366 
Protein GI158521496 
COG category[R] General function prediction only 
COG ID[COG3894] Uncharacterized metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACG CAAACCAGAC ATGGGTTGAA CAGATTTTTC TGGTTCCGCC CTCCCTGCGG 
GACAATACCG CGGATGCCGA CCGACTGCTG GCCGCGTTGC GAAACCGCCT GGAAACCGAC
ACCATCATTG CTGAAATCGG CCTGCTGCGG GACCTGCCGG ACCGCCTGCG GCAGTGGGGC
TACCAGGCCC GGTGTATTCT CTTTTCAGAC GGAAACGTGT TTTACCTGGT TGACGTGACC
GACCCGAAAG GACAACCGCC CTGCGCCGGC CTGGCCGTGG ACCTGGGCAC CACCCGGGTG
GTGACCCGGC TGATCAACCT GGAAACCGGG GCTGTCCTGG CCGAAACCTC TTTTGAAAAC
CCCCAGACCG CGATCGGCGA CGACATTCTC ACCCGCATTC ATTACGCGGA CAGGCCCGGC
GGGCTGGACC ACCTCCGCGA CCTGATCATT GACGGGTTGA ACCGCGCCAT CGGCGAGTTG
TGCCACCAGG CCGGGATCGG TACGACAGAT ATCTACCTGC TGGCCGTGTC CGGTAACACC
ACCATGACCC ACCTTTTCTT AAAGCTGCCG CCGCGCTGGA TCATCCGGGA GCCCTATATT
CCGGCAGTCA ACACGCCCGG CATCGTCAAG GCCGCTGAAC TGGGCATTGA CGCCAACCCC
AGGGCACGGG TCTTTTTCTT TCCCAGCGTG GGAAGCTACT TCGGCGGAGA CCTGATATCC
GGCATCCTGT TTGGAAAACT GCACCGGTCC GACGCCACCT CCCTGCTGGT GGACGTGGGT
ACCAATGCCG AGGTGGTGCT GGGCAACCGC GAATGGCTCA TTGCCTGCGC CGGCGCCGCC
GGCCCGGCCC TGGAGGGCGG TGTGGCAAAA ATCGGGGCCA AGGCCGGGCC CGGCGTAATC
GACACCATCG CCATTAATGC CGCCACCGGC GATATAACAT TTGATACCAT TGAACACTCG
GCGCCAAAGG CGATCTGCGG ATCGGCCCTC ATCGACCTGG TGGCCCATCT TTTTGCAGGC
GGCATCCTGG ATATTCGAGG AAAACTGGTG CCGGAAAAGG CGCCGGGCAG AATCGAAACC
GACGACGGGA TCATGGCCTA TGTGGTGGTG CCGGCCGGCC AGTCAGCCAC GGGTCAGGCG
CTTGTGTTTT CCCAGCCGGA CATTGACAAC ATCATCCGGT CCAAGGCCGC CATGTACACC
ATTCTGGAAA CCCTGACCGC ATCAGTGGGG CTTGCCCTGT CCGACATCGA CACCTTTTGC
GTGGCCGGCA CATTCGGCTC TTTGATCAAC CCCCGGTCGG CCATCACCAT CGGCATGCTG
CCCGACCTGC CCATCGAACG GTTCAGGGTG CTGGGCAACA GCTCTCTTGA AGGCGCGGCC
CTGCTCCTCT CCTCGCGCCA CCCGGTCACC GAGATCGCCG CCATCCGGAA CCGGATCACC
TACCTGGAAC TCAACGTGAA CCAGGAGTTC ATGAACCGGT TCAGCGCGGC CAAGTTTCTG
CCCCACACCG ACACAACCCT TTTCCCGTCG GTGACTGTTC CTGCTTTCGC TTCGTCATTA
CCCGATAAAA TGAGAAAGAT GGTCTCCTTT GAGGCGGCAG CCTCAATATG TTAG
 
Protein sequence
MNDANQTWVE QIFLVPPSLR DNTADADRLL AALRNRLETD TIIAEIGLLR DLPDRLRQWG 
YQARCILFSD GNVFYLVDVT DPKGQPPCAG LAVDLGTTRV VTRLINLETG AVLAETSFEN
PQTAIGDDIL TRIHYADRPG GLDHLRDLII DGLNRAIGEL CHQAGIGTTD IYLLAVSGNT
TMTHLFLKLP PRWIIREPYI PAVNTPGIVK AAELGIDANP RARVFFFPSV GSYFGGDLIS
GILFGKLHRS DATSLLVDVG TNAEVVLGNR EWLIACAGAA GPALEGGVAK IGAKAGPGVI
DTIAINAATG DITFDTIEHS APKAICGSAL IDLVAHLFAG GILDIRGKLV PEKAPGRIET
DDGIMAYVVV PAGQSATGQA LVFSQPDIDN IIRSKAAMYT ILETLTASVG LALSDIDTFC
VAGTFGSLIN PRSAITIGML PDLPIERFRV LGNSSLEGAA LLLSSRHPVT EIAAIRNRIT
YLELNVNQEF MNRFSAAKFL PHTDTTLFPS VTVPAFASSL PDKMRKMVSF EAAASIC