Gene Dole_1475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1475 
Symbol 
ID5694312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1763730 
End bp1764539 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content56% 
IMG OID641264070 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001529356 
Protein GI158521486 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAATT TAAAGGGTAA AACGGTTTTT ATCACCGGCG GCGCTTCCGG TATCGGCAAG 
GCGCTTTCCC GCTGTTTTGC AAAGGAGGGC GCCAACCTGA TTCTCATGTC CCGCGAGGGG
ACAAAAGAAG ATCTCATTCT AAAGGAGTGG GCCGAATCGT TGCGGAAAAC CTGTTCCGTC
GAGGTATGGA CCGTCAGCTC TGAACTGTCT CGCCCTGAGG GGCCGGAAGA CCTTTACAAC
CAGGTCAAGG CCTGCTCGCC GCGCGTCGAT GTGCTGGTGA ACAATGCCGC TGCCATGGCA
TTCGGTCTGT TTCATGAACT CTCCCTGGCC GATCAGGATC AGCTTGTTGC TGTCAACGCG
CGGGCCTATA TGGCGCTGAT GCGACTGTTT ATTCCCGAGA TGGTGCAGCG TGGATCAGGG
CATGTGCTGA ATGTCTGCTC TGTGTCGGCT TTTGTACCCA CCCCCCGTCA CGCGGTTTAC
GGCGCCACCA AGGCCTTTGT TCAGGCCTTA AGCGAGGCAG TAAATGAAGA GCTGAAAGGC
ACCGGCGTTA CTGTTTCTAC CCTGAACCCC GGCTACACCG ACACCCCGCT GCTGCAAGGC
GGCGGCTTTC CCAAAAAACT GAGGTTCTAC AGCTTTGCCG GCAAGGCCAG CCCGGCGGTC
ATCGCCGAAA AGGGGGTGAA GGCCTTTATC AAAGGAAAGC GGGTCTATGT GCCGGAGCCC
CATCTGCGGG CGCTTTTCCT GTTTTTTAAC CGGTTTACGC CCAAGCGCTT TATCAACGCC
ATTTCAGAGT GGATGGTAAA AGGCACCTGA
 
Protein sequence
MINLKGKTVF ITGGASGIGK ALSRCFAKEG ANLILMSREG TKEDLILKEW AESLRKTCSV 
EVWTVSSELS RPEGPEDLYN QVKACSPRVD VLVNNAAAMA FGLFHELSLA DQDQLVAVNA
RAYMALMRLF IPEMVQRGSG HVLNVCSVSA FVPTPRHAVY GATKAFVQAL SEAVNEELKG
TGVTVSTLNP GYTDTPLLQG GGFPKKLRFY SFAGKASPAV IAEKGVKAFI KGKRVYVPEP
HLRALFLFFN RFTPKRFINA ISEWMVKGT