Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1467 |
Symbol | |
ID | 5694304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | - |
Start bp | 1753113 |
End bp | 1754006 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641264062 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_001529348 |
Protein GI | 158521478 |
COG category | [R] General function prediction only |
COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACATCC TCATCACCGG CAGTTCCGGT TTTGTCGGCA CCCACATGAC GGCACAACTG CTGGACATGG GCCACACGGT CACCGGCGTG GACCGGTCGG CCGGCATGTT CCGCCATGAA AAGTTTGCGT ATGTCCAGGC CGACACCACT TCCTCCGGAC CGTGGCAGGA GTCCGTGACG GCAGCACAGG TCATCATCAA TCTGGCCGGG GTCAATATCT TCCGGCGCTG GACCAGGGCC TATAAGCAGC TGATCTACGA CAGCCGCATC ATGACCACCC GCCGCGTCGT GGAAGCCCTG CCTGCCGACG CATCGGGCAT TACCCTGTGC AACACCTCGG CCGTGGGATA CTACGGCGAC GGCGGGGATG AGATATTAAC GGAACCGGGC ACACCCGGCG CCGACTTTCT GGCCAGGGTC TGCGTGGCCT GGGAAAAAGA GGCGTTTGAA GCCGGAAAAA AAGGAGCCCG GGTGGTGGCC ACCCGGTTCG GCGTGGTGAT GGGGCCGGGC GGCGGAGCCC TGTCCAAAAT GGTTCCGGCC TTCCGCCTGT TTGCCGGAGG GCCCCTGGGT TCCGGCAATC AATGGTTTCC CTGGATTCAC ATTGACGACC TGGTTGCGGC CATGGTGTTT GTGGCCACCC ATGACAAGGT AAAGGGACCG GTCAACTTCT GCGCGCCCAA CCCGGTTCAG AACGCCGATT TTGCCAGAAC CCTCGGCCGT GTCCTGAACC GGCCCGCTTT CTTAAAAGTG CCCAAATTCG CGCTTAAACT GGCGGCCGGT GAAGTGGGGG GGCTGATTCT AAACAGCCAG CGGGCCGAGC CGGAAAAACT CATGGCCAAC GGCTTTGTCT TCCGTTACCC GGAGCTGGAG CCGGCCCTGC GGGCATCGGT ATAA
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Protein sequence | MHILITGSSG FVGTHMTAQL LDMGHTVTGV DRSAGMFRHE KFAYVQADTT SSGPWQESVT AAQVIINLAG VNIFRRWTRA YKQLIYDSRI MTTRRVVEAL PADASGITLC NTSAVGYYGD GGDEILTEPG TPGADFLARV CVAWEKEAFE AGKKGARVVA TRFGVVMGPG GGALSKMVPA FRLFAGGPLG SGNQWFPWIH IDDLVAAMVF VATHDKVKGP VNFCAPNPVQ NADFARTLGR VLNRPAFLKV PKFALKLAAG EVGGLILNSQ RAEPEKLMAN GFVFRYPELE PALRASV
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