Gene Dole_1465 details

Gene Information

• Locus tag: Dole_1465
• ID: 5694302
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 1749215
• End bp: 1751158
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 641264060
• Product: ferredoxin
• Protein accession: YP_001529346
• Protein GI: 158521476
• COG category: [R] General function prediction only
• COG ID: [COG3894] Uncharacterized metal-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAAAC ACAGCGGCGG ACTGGATGAT GTTGGCGCTG AGGAGAAGAA GGAGTGTACC 
GTCACTTTTC ACCCCGACAA TCAGGTGGTC ACCCTGGCGG CCGGCAGCAC CCTGCTGGAC 
GCGGCAAAGA GCGGAGATGT GCCATTAAAC GCCTCCTGCA ACGGCAAGGG CTCCTGCGGC 
AAGTGCAAGC TGGTGGTGGT TTCCGGTAAG GTGGACCATC CTTCAACGCC GCTGCTTACT 
GATGATGAAA AGAAAACCGG TTACGTGCTG GCCTGCCAGG CGAAACTTTC CGGGGATGTG 
ACGGTGCGCA TTCCCGAGGA GACGCTGGAG AAGAAACTCC AGGTGGCCGG CATGGGCGCC 
GAGGTGACCG ACCGGTTAAA GGGACTGGTT GCGGAGATTA CCCTCATGCA CGAGTCGGTG 
TCCCTGGAGC TTGCGCCGCC TACCATGGAC GATGCGGTCA GCGACCTGGA CCGGCTGAAC 
CGGGGGCTCA AGCAGCAGGG GTATGATCTG GACCGGATGA ACATGGGGCT CCGGGTCATG 
CGGGACATGG CCTCGGTCAT GCGCAGCCAG AACTTCCATG TCACGGCCCA TATCCTGAAG 
AAGCGCTGTT CCAATGAGGT GGTGGGTTTA AATGCCGGGA ACTCGGCCGG TCCCGGCCTG 
GGCCTGGCCA TTGACGTGGG CACCACCTCC ATCGTGGTCT ACCTAGTGGA TATGACCGAT 
GGCACGGTGA TTGCCGCCAC CGCCGGGCAT AACCGGCAGG CGGCCTGCGG CGATGACGTG 
ATCAACCGGA TTGTGTGCTC GGAAAAGGAC GGCGTTAAAA AGCTGCGCAC CATGGCCCTT 
GCCACCATCA ACGGCCTGTT GAATGAAGCA CTGTTTGCCG CGGGCCGGGA TCGCCGCGAG 
GTCACCAACA TCGCCCTGGC CGGCAACACC GTCATGACCC ACCTGCTGCT GGGCATCGAG 
CCGCGCAACA TCCGGCGTGA ACCTTACGTT CCTACCGTTT CGGAGTTTCC CATACTCAAG 
GCCATCGAAG TGGGGATCAA GGCCGATCCG GACGCGGCGG TGTTTATCAT GCCCGGCCCG 
GCCGGTTACG TGGGTGGTGA TATTGTTTCA GGCCTGATCT ACACCGGGTT TCACCGGGAA 
GAGGCCATGA CCCTGTTCAT CGACGTGGGG ACCAACGGCG AGATCGTGCT GGGCAACAAC 
CAGTGGCTGC TTACCGCTTC CTGCTCGGCC GGACCGGCTT TTGAAGGCGG CGGCGTGCGT 
TGGGGCATGC GGGCCGAGGA GGGAGCCATT GAAAAAGTGG CAATTGACGA AGATACCATG 
GTGTCTGAAA TTTCAGTGGT GGGCGGCAAA CCGGCCCGGG GTATCTGCGG GTCGGGCATG 
ATCGACCTGA TTTCCGAGAT GCTGATGACC GGTGTCATTC AGGCCAACGG CAAATTTGCC 
CTGGACGCGG ACCATCCGCG CATGGCCGCC ATCGGCGATG AAAAGGCCTT TGTTGTGGCC 
ACGGCCGACC AGACATCCGT GGGCCAGGAT ATCGTGTTTA CCGAGTCGGA CATCGACACC 
ATCATTCGCA GCAAGGGCGC GGTCTATGCC GGCTTCACCG TGCTGCTGCG CCAGGCAGGC 
ATTGATTTTT CCATGCTTGA TCAGGTGATC ATCACCGGCG GGTTCGGCCA GTTTTTAAAC 
ATTGAAAAGG CCATTACCAT CGGTCTGCTG CCCGACATCG ACCGGGCAAA ATTCAAGTAC 
ATGGGCAACA GCTCTGCCGC CGGAGCTTAC ATGGCCCTGC TTTCGGAAAA ACACCGCAAG 
GAGGCGGTTC ATGTGTGCAA CAGCATGACC TACGTGGATT TTTCCAGCAA CAACGAGTTT 
ATGAGCGAAT TTACATCAGC GCTTTTTTTA CCCCATACGA ATCTGGAAGA TTTTCCTTCG 
GTAAGACGCT CAAAAAGGCC TTGA 

 

Protein sequence

MTKHSGGLDD VGAEEKKECT VTFHPDNQVV TLAAGSTLLD AAKSGDVPLN ASCNGKGSCG 
KCKLVVVSGK VDHPSTPLLT DDEKKTGYVL ACQAKLSGDV TVRIPEETLE KKLQVAGMGA 
EVTDRLKGLV AEITLMHESV SLELAPPTMD DAVSDLDRLN RGLKQQGYDL DRMNMGLRVM 
RDMASVMRSQ NFHVTAHILK KRCSNEVVGL NAGNSAGPGL GLAIDVGTTS IVVYLVDMTD 
GTVIAATAGH NRQAACGDDV INRIVCSEKD GVKKLRTMAL ATINGLLNEA LFAAGRDRRE 
VTNIALAGNT VMTHLLLGIE PRNIRREPYV PTVSEFPILK AIEVGIKADP DAAVFIMPGP 
AGYVGGDIVS GLIYTGFHRE EAMTLFIDVG TNGEIVLGNN QWLLTASCSA GPAFEGGGVR 
WGMRAEEGAI EKVAIDEDTM VSEISVVGGK PARGICGSGM IDLISEMLMT GVIQANGKFA 
LDADHPRMAA IGDEKAFVVA TADQTSVGQD IVFTESDIDT IIRSKGAVYA GFTVLLRQAG 
IDFSMLDQVI ITGGFGQFLN IEKAITIGLL PDIDRAKFKY MGNSSAAGAY MALLSEKHRK 
EAVHVCNSMT YVDFSSNNEF MSEFTSALFL PHTNLEDFPS VRRSKRP