Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1460 |
Symbol | |
ID | 5694297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1742629 |
End bp | 1743129 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641264055 |
Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
Protein accession | YP_001529341 |
Protein GI | 158521471 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000103608 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGTCA GACTGGATAC CAGCATGGGA GAGATCGAAC TGGAGCTTTT TGAGGATAAG GCGCCGAAAA CCACGGCCAA CTTTGTTTCA TATGTCAGGT CAGGGCATTA TGATGGAACC ATTTTTCACC GGGTTATCGA CGGATTCATG ATTCAGGGCG GCGGTATGGA TGTGGACATG AAGGAAAAGC CCACCGGCCC GCCCATTGAA AACGAGGCGG ACAATGGATT GAAAAATGAC GCCTATGCCG TGGCCATGGC CCGCACACCG GATCCGAACA GTGCCACGGC CCAGTTTTTT ATCAATGTGA AGAAAAATGA TTTTCTCAAC CACACCGCCA AAAATCCCCA GGGGTGGGGA TACGCGGTCT TTGGCAAGGT GGTCAAGGGC CATGGTGTGG TCAACAAGAT CAAGGGCGTG GCCACCGGCA GAAAGGGCAT GCATGATGAC GTGCCCCAGA CCCCGGTGGT GATCAACAAG GCCGAGGTGA TTGAAGCGTA G
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Protein sequence | MNVRLDTSMG EIELELFEDK APKTTANFVS YVRSGHYDGT IFHRVIDGFM IQGGGMDVDM KEKPTGPPIE NEADNGLKND AYAVAMARTP DPNSATAQFF INVKKNDFLN HTAKNPQGWG YAVFGKVVKG HGVVNKIKGV ATGRKGMHDD VPQTPVVINK AEVIEA
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