Gene Dole_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1460 
Symbol 
ID5694297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1742629 
End bp1743129 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content53% 
IMG OID641264055 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_001529341 
Protein GI158521471 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000103608 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTCA GACTGGATAC CAGCATGGGA GAGATCGAAC TGGAGCTTTT TGAGGATAAG 
GCGCCGAAAA CCACGGCCAA CTTTGTTTCA TATGTCAGGT CAGGGCATTA TGATGGAACC
ATTTTTCACC GGGTTATCGA CGGATTCATG ATTCAGGGCG GCGGTATGGA TGTGGACATG
AAGGAAAAGC CCACCGGCCC GCCCATTGAA AACGAGGCGG ACAATGGATT GAAAAATGAC
GCCTATGCCG TGGCCATGGC CCGCACACCG GATCCGAACA GTGCCACGGC CCAGTTTTTT
ATCAATGTGA AGAAAAATGA TTTTCTCAAC CACACCGCCA AAAATCCCCA GGGGTGGGGA
TACGCGGTCT TTGGCAAGGT GGTCAAGGGC CATGGTGTGG TCAACAAGAT CAAGGGCGTG
GCCACCGGCA GAAAGGGCAT GCATGATGAC GTGCCCCAGA CCCCGGTGGT GATCAACAAG
GCCGAGGTGA TTGAAGCGTA G
 
Protein sequence
MNVRLDTSMG EIELELFEDK APKTTANFVS YVRSGHYDGT IFHRVIDGFM IQGGGMDVDM 
KEKPTGPPIE NEADNGLKND AYAVAMARTP DPNSATAQFF INVKKNDFLN HTAKNPQGWG
YAVFGKVVKG HGVVNKIKGV ATGRKGMHDD VPQTPVVINK AEVIEA