Gene Dole_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1454 
Symbol 
ID5694291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1737161 
End bp1737661 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content60% 
IMG OID641264049 
ProductMarR family transcriptional regulator 
Protein accessionYP_001529335 
Protein GI158521465 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0425619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGATA AAAATATGAA AAACAGCCAT GTGCTCGATG ACGCGGATGA CCCCCGTTCC 
TGTGTCTGTT TCCTTTTGTC CAGGGCCGCC CAGACCGCCC AGAAACATCT TCGTATCGCC
CTGGAACCTT ACGGCCTGAC CCCGGCCCAG TACCTGATCA TCGAATGCCT GTGGCTGTCG
GACCGCATGT CCCCCAAGGT GATCGGCGAA CTGCTGCGGT TTGATTCCGC CACCCTTACC
GGCCTGGTGG ACCGGCTGGA GCGGGCCGGC TTTGTATTTC GCCAGCCCGA CCCGGATGAC
CGGCGGGCCA TTCGCATCTG CCTGACCGAC AAGAGCCTGG GCATGAAGGC AGAGCTCCGG
GCACTCCGGC TTCATGCCAA TGAAGAGATT TTAAAGGTTT TTCCCCGGCA CCAGCAGGGT
GTATTCAAAC AGGCCCTGAT GTCGCTGATC GCGGCCGAGG ACGCCGTGCC GGTGGCCGGG
CAGCCGAACA GCAAAAGATG A
 
Protein sequence
MRDKNMKNSH VLDDADDPRS CVCFLLSRAA QTAQKHLRIA LEPYGLTPAQ YLIIECLWLS 
DRMSPKVIGE LLRFDSATLT GLVDRLERAG FVFRQPDPDD RRAIRICLTD KSLGMKAELR
ALRLHANEEI LKVFPRHQQG VFKQALMSLI AAEDAVPVAG QPNSKR