| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1452 |
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| Symbol | |
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| ID | 5694289 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1731916 |
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| End bp | 1733343 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641264047 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001529333 |
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| Protein GI | 158521463 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTCA TACCGGCGCA TTCGTTTTGG ATAAAACGTA TGGAGTCCCT GCGAACATCA
AAACGCGCCG TACTGATCGT GGCCGCGGTG ACCACCTTCA TGGGCCCTTT CATGGTCTCC
GGCGTCAACA TCGTGCTGCC GGCCATGGGC ACTGATTTTG CCGCCGGTGC CGTTCTGCTG
AGCTGGGTGG CCAATGCCTA CCTGCTCTCC ACCGCCGTGA TGCTGGTGCC GGCCGCCAAG
ATCGCGGACA TGGCCGGGCG CAGAAAAATA TTCATTTACG GCATCGGCCT GTTTACTGCG
GCTACCGTGC TGATTGCCTT TGCCCCGACG ATCTGGATGG TGATCGGGCT GCGAATGCTT
CAGGGAGTGG GCGCGGCCAT GGTCTCCACC ACGGGCATCG CCATCGTGGC CGCCGTGTTT
CCGGTATCGG AACGGGGCCG GGCCATCGGC ATCACCGTGG CCGCGGTCTA TATCGGGCTC
TCCACCGGGC CTTTTGCCGC CGGGTATCTG TCGGCCCTGT GGGGCTGGCG CAGCCTGTTT
CTGGTCACCT TTCCCATGGG CCTTCTTTCG GTCTATCTTG CCGCCACCAT GATCAGGGAT
GAGTGGACCC CTGCCGCGGG CCAGCCCCTG GACATCATCG GCACGCTGCT CTATGGCCTC
TGCCTGGTGC TGCTGATGGC TGGTCTCTCC GGCATGCCGG GAATAAAAGG GACAATGGCA
CTGGTCGGAG CAATCGTATG TTTCTATCTG TTTATCCGCC AGGAGTTAAA AACCCCCTAC
CCGGTGGTGG AGATCGCCCT GTTTCAGAAG AACCGGGGGT TTGCCTTTTC CAGCCTGGCG
GCCCTGATCA ACTATGCCGC CACCTTTGCC GTGGCCTTTT ACCTGAGCCT CTACCTGCAG
TATATCAAGG CCATGACACC CCAGACCGCC GGCCTTGTCC TAATCACCCA GCCGGTGGTC
ATGGCCCTGT TTTCCCCTCT GGCCGGCCGG CTTTCGGATC GGTTTGAACC CGGCGCCATC
GCCTCCCTGG GCATGTCCCT GTGCGCCACG GGCCTGCTGC TGCTGGCCCT CCTGAACGGC
GGCTCCGGCA TTTCCTATAT CGTAGGCACC CTGCTCCTCC TGGGCCTGGG GTTTGCCCTG
TTTTCCTCAC CCAACATGAA CGCCATCATG AGCAGCGTGG CGCCGGCCCA TTACGGCCTG
GCCTCGGGCA CAGTGGCCAC CATGCGACTG ATCGGCCAGA TGCTGAGTAT GGCCATTGCC
ACCCTCTTTT TCGCCCTGTT CATCGGTGAC GTCCAGATCA CGCCGGAAAC CCACACCGCT
TTTTTACAGG CCATGCGGCT GGGCTTTGCC GTGTGCTGCG GCCTCTGCCT GATCGGCATC
TACTTCTCCT GGAACCGAGG ATCGATTCGT GCCAATACCG ACTCCTGA
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| Protein sequence | MELIPAHSFW IKRMESLRTS KRAVLIVAAV TTFMGPFMVS GVNIVLPAMG TDFAAGAVLL
SWVANAYLLS TAVMLVPAAK IADMAGRRKI FIYGIGLFTA ATVLIAFAPT IWMVIGLRML
QGVGAAMVST TGIAIVAAVF PVSERGRAIG ITVAAVYIGL STGPFAAGYL SALWGWRSLF
LVTFPMGLLS VYLAATMIRD EWTPAAGQPL DIIGTLLYGL CLVLLMAGLS GMPGIKGTMA
LVGAIVCFYL FIRQELKTPY PVVEIALFQK NRGFAFSSLA ALINYAATFA VAFYLSLYLQ
YIKAMTPQTA GLVLITQPVV MALFSPLAGR LSDRFEPGAI ASLGMSLCAT GLLLLALLNG
GSGISYIVGT LLLLGLGFAL FSSPNMNAIM SSVAPAHYGL ASGTVATMRL IGQMLSMAIA
TLFFALFIGD VQITPETHTA FLQAMRLGFA VCCGLCLIGI YFSWNRGSIR ANTDS
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