Gene Dole_1438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1438 
Symbol 
ID5694275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1713255 
End bp1714277 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content53% 
IMG OID641264033 
Producthypothetical protein 
Protein accessionYP_001529319 
Protein GI158521449 
COG category[S] Function unknown 
COG ID[COG4641] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATTG TTCACGCAGC CATATTCAAC ACCTTCAAAT ACGGCCATGA GTACTACTCC 
ATGGACCGAA AAATATCCAA CGGCCTGATC CGGGAGGGCC ATTTTGTTTA CGACTTCAGT
TACCGGGACG TCTGCCGGGC TGAAAACCCC TTCAAAACCA CCAGCATCGG GAAGGGTAAA
ATGAACCGGC TGCTGATCCT CACGGTAGAC GCGGTGCAAC CCCACCTGCT GCTACTGGGT
CACAGCGAAA TGATCACCGC GGAAACCCTG AACCACATCA GAACAACACA CCCGGATATT
CGCATTGGAC TGTGGTATGT CGATCCGCTT TTTCATACCG ATCGCATTCA GCATCTGATC
AAGCGGCGGG GCTGCATGGA CGCCATGTTC ATCACCACCG GCGGAGACCT TTTGCGCCAG
TTCAAAACCC CGGAAAACCG AATCGCCTTT CTGCCCAACA TCTCTGACCC GTCGGTGGAT
ATCAACACCA ACCACGAAAA AGAACGGTTC GACATCGACT TTATTTTCGG CGGTAGCGAC
AGTAAAGAGC CCGAACGCCA GGCGTTTTTA AAAAATATGA CAGCCGCGCT GGGAAAGACC
ATGCGGTGCG AACTCTGGGG GGCACTGGGC AACCCTTTTT ATACGGACCA CCAGTTCTAC
GAAAAGCTAA GCCGGGCAAA GATGGGGCTC AACCTGAGCC GGCGCAATGA TGTCTATCTT
TATACCTCCA ACCGGATCAC CCAACTGGCC GGCAGCGGTA TCCTGACCTT TTCGCCCCGG
GTTCCGGGTC TTGAAAAGGT TTACAGTGAG AACGAGGTGG TCTATTTTGA CGGCCTGGAC
GACCTGGTGA AAAAGGCCAA TTATTTTCAC ACCCACGACG ACGAGCGCAA ACAGATAGCC
TCGGCCGGGT GGGACCGGAC CCACCGCTCC TACAACTGTC AACGGGTCAC CCGGTTCATG
CTGGATCTGC TGTTCGAACA GCCTTTTTCC GAACCCTATG AATGGATATC TGAAATCATC
TGA
 
Protein sequence
MRIVHAAIFN TFKYGHEYYS MDRKISNGLI REGHFVYDFS YRDVCRAENP FKTTSIGKGK 
MNRLLILTVD AVQPHLLLLG HSEMITAETL NHIRTTHPDI RIGLWYVDPL FHTDRIQHLI
KRRGCMDAMF ITTGGDLLRQ FKTPENRIAF LPNISDPSVD INTNHEKERF DIDFIFGGSD
SKEPERQAFL KNMTAALGKT MRCELWGALG NPFYTDHQFY EKLSRAKMGL NLSRRNDVYL
YTSNRITQLA GSGILTFSPR VPGLEKVYSE NEVVYFDGLD DLVKKANYFH THDDERKQIA
SAGWDRTHRS YNCQRVTRFM LDLLFEQPFS EPYEWISEII