| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1433 |
|---|
| Symbol | |
|---|
| ID | 5694270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1706664 |
|---|
| End bp | 1709042 |
|---|
| Gene Length | 2379 bp |
|---|
| Protein Length | 792 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641264028 |
|---|
| Product | tetraacyldisaccharide 4'-kinase |
|---|
| Protein accession | YP_001529314 |
|---|
| Protein GI | 158521444 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase
[COG1663] Tetraacyldisaccharide-1-P 4'-kinase |
|---|
| TIGRFAM ID | [TIGR00682] tetraacyldisaccharide 4'-kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGGT GTTACAACCT GGTACTGATG GTGCTTTTTG TGGTGGCCGG CCCCCCGGCC
CTGGTGGCTT CCCTGTTTTC GAAAAAGCGC AGGACCACGG TTTTCAAACG GCTGGGGTTT
CAGGAGATTC CCGATCACCG GCGACTGGAG AAAGATCGCC CGGTCTGGGT TCATGCCCTG
TCCGTGGGAG AGGTGCTTTC CGCCGTTGAA TTGACGGCCC GGTTAAAAGC GGCTTTCCCC
GGCCGGCCAG TCTTTTTTTC GGCAACCACC CGGACCGGCA TCGACACAGC CCGGAATCGT
TTGGCCGGCA TCGCTGATGA GGTTTTTTGT TTTTGCTATG ATCTTCCTTT TTCCGTGGCG
CGCATGGTCA ATCGGATCAA TCCCGGCCTG GTGGTGGTGG TGGAATCCGA TATCTGGCCC
AACTTTCTCT GGACCCTTGA GAAGCGGCAC GTTCCTGTCG TTCTGGCCAA TGGCCGGCTG
TCAGAGAAAA GTTTTGCCGG GTATCGCCGG TTTTCATGTG TCATGGGCCC GGTGTTGAAC
ACGTTTTCCG CCATCTGTGC TCAGACACGG CAGGATGCCG ACCGCTTTGC CGCCCTTGGC
GTTGCCGGAG AAAAAACAGT GGTGACGGGC AGCATCAAGT TTGACCGGCA AGCGCCCTCT
TTGTCCAGTG ACCAGCGCAT TGATCTTCGC CACCGCCTGG GCATTGCACC TGATGCCCGC
ATCCTGGTGG CCGGCAGCAC GCATCCCGGC GAAGAAGAAG GTCTGGCCAG CGCCCTGGCT
GGTGTGTGGA AAGCGTTTAA ACACCTGGTG CTGGTGGTCG CGCCCCGCGA CCCGGCCCGG
TCCGGCGACG TGGCCGCAAT ATTCGGCGGT CCGGACGCCG GGGCCTTTAC CCTGACCGGG
GTGGGGCAGG CGGACAGACC CGGCCCGGTT CGGGTGGTGG TGATTGACCG TATCGGCCTG
CTTAACGATC TGTATGCTGT TGCGGACATC GCGGTTATCG GCGGGAGCTT TTTAAACCTG
AGGGGGCACA ATCCCCTGGA ACCGGCGGCC TGCAGTGTTC CGGTCCTGTT CGGCCCTCAC
ATGGAGGACT TTGCCGAAAT CGTCCGGCTG CTGATCGACG ACGGCGGCGC CCTTCAGGTA
AAGGATGTGG AGACACTGGG ACCTGTTATC ACCGGCCTGC TGACCGACCG GGACCAGCGC
CGCCAGATGG GCCGGGCCGC CTTTCAAGTA TTTGAAGCCA ACCGGGGCGC CCTGGACAGG
GTAATGACCG TGTGCCATAT AGCGGAGAAA AACCCGCCGC CAGCCAGACC TGTTACCGGC
GGCGGGACTC TTTTAATGCC GCTTTCCTTT CTGTACGGCG GAGCCGCGCG CTTGCGGCGC
GGCCTGTACA CGAAAGGTTT CATTCGACCC CGGCAGCTGC CCTGCCTGGT GATATCGGTG
GGCAACATCA CCGTGGGCGG CACCGGCAAG ACCCCCATGA CCATCTATCT CGCCAAACTG
CTGGTCCGAA TGGGGCGGGC CCCCATGATC GTCAGCCGGG GATACCGGGG CACTGCCTCG
GTAACCGGTG GCCTGGTGAG TGATCACACC GGTGTGCGCA TGAATGTGGG CCAAGCCGGG
GATGAACCTT TTATGATGGC CCATGCCCTG CCCGGTGTGC CCGTGGTGGT GGGGAAAAAG
AGGTACCGGG CCGCCACCGC CGCCATGGCG GACCTTCCCA CGGACGTGGT GATTCTGGAT
GACGGGTTTC AGCACTTTCA ACTGGCCCGG AACCTGGATA TTCTACTGCT GGACAGCACC
CGGCCTGTGG GTAACGGAAA ACTTCTGCCC GCCGGACCTC TGCGGGAACC CCTGTCCTGT
CTGGCCCATG CCCATGCGTT TGTTTTTACC CGGTCGGATC CGGCTGCTGA TTTGCGGCCG
GATTCGGCCA TCTTACCTTA TTTGAAGGAA AAGCCTGTTT TTCGGGCCTT TCACCGGCCG
GTGCTGGACG GGTGGGTCAG GGCCGGGGAC GAAGCGATGG CCCCGGCCCA ATCGGCTGAT
GTCACGCTAT TAAAGAACTT GCCGGTATTT GTATTCTGCG GACTTGCGCA AAACAGCGGG
TTTTTAAAAA GCGTTCGGCA GACAGGCGCC CGGGTGACGG GCCACCTGTT TTTTCGGGAC
CACCATGCCT ACACGGACGA GGACCTTTCC GTTATCTCCG GCCGTGCCTT GGCATCCGGG
GTAAAAACAG TTGTCACCAG CAAAAAGGAT TACGTAAAAT TTTCCGGTCG GGTGGGCCTT
TTAGGAGTTG ATCTGGCGGT GCTGGGCGTG GAGATTGATT TCGGCCCGGA CCGGGGGGGG
GTTGAATCCT TTGTGGCCGC GTCGTTGCGG GACAAATGA
|
|---|
| Protein sequence | MKWCYNLVLM VLFVVAGPPA LVASLFSKKR RTTVFKRLGF QEIPDHRRLE KDRPVWVHAL
SVGEVLSAVE LTARLKAAFP GRPVFFSATT RTGIDTARNR LAGIADEVFC FCYDLPFSVA
RMVNRINPGL VVVVESDIWP NFLWTLEKRH VPVVLANGRL SEKSFAGYRR FSCVMGPVLN
TFSAICAQTR QDADRFAALG VAGEKTVVTG SIKFDRQAPS LSSDQRIDLR HRLGIAPDAR
ILVAGSTHPG EEEGLASALA GVWKAFKHLV LVVAPRDPAR SGDVAAIFGG PDAGAFTLTG
VGQADRPGPV RVVVIDRIGL LNDLYAVADI AVIGGSFLNL RGHNPLEPAA CSVPVLFGPH
MEDFAEIVRL LIDDGGALQV KDVETLGPVI TGLLTDRDQR RQMGRAAFQV FEANRGALDR
VMTVCHIAEK NPPPARPVTG GGTLLMPLSF LYGGAARLRR GLYTKGFIRP RQLPCLVISV
GNITVGGTGK TPMTIYLAKL LVRMGRAPMI VSRGYRGTAS VTGGLVSDHT GVRMNVGQAG
DEPFMMAHAL PGVPVVVGKK RYRAATAAMA DLPTDVVILD DGFQHFQLAR NLDILLLDST
RPVGNGKLLP AGPLREPLSC LAHAHAFVFT RSDPAADLRP DSAILPYLKE KPVFRAFHRP
VLDGWVRAGD EAMAPAQSAD VTLLKNLPVF VFCGLAQNSG FLKSVRQTGA RVTGHLFFRD
HHAYTDEDLS VISGRALASG VKTVVTSKKD YVKFSGRVGL LGVDLAVLGV EIDFGPDRGG
VESFVAASLR DK
|
|---|
| |