| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1429 |
|---|
| Symbol | |
|---|
| ID | 5694266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1701996 |
|---|
| End bp | 1702916 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641264024 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001529310 |
|---|
| Protein GI | 158521440 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGGA CCATGACACA ACATCCCCGC ATGCTCCGTA TTGCCGACCA TCTCTATCTG
GTCCGTGCCC CGGCCAAGGG CCGTTTCCCC TTCTGTCACG GGTTTCTTTT TTGTGGCGGG
GGCCAGACCC TGATGATCGA CGCCGGTCTG GGGCCGGAGC TGACTCAGGA GATTGACCGG
TTGTGCCGTA TCGACATTCT GGTGATTTCT CACTCCCATC CGGACCATAT TCTAAACTGG
CACCTGCTGG AAGACAGGAC TCTGCTGCTG CCCCGGCAGA CGCCGGACTC GGTGACCGAC
CTTGACCGTT TGGGGGTGCG TTACACCGGC ACACCGGAGC GGGGGGCCCA CTGGGTCAAT
GCCATCGGCA GGCCCCTGGG GCTGCGGCCG TTTCGCAAAC CGGACGGCCG GTTTGACAAC
GGTCACATAT TTGCCCTGGG ACCGGCCCGT ATCGAGGCCA TTCACGCGCC GGGCCATCTG
GATGATCATT ACTGTTTTTT TGATCACGGG TCCGGCACTC TGATCACCAC GGACATCGAT
TTTTCCGGCT TCGGCCCCTG GTACGGCAAC CCGGAAGGCG CCATAAAACC CTTTCAGGAA
AGCATTCGGC GGCTGATGGA GCTGCCCTAC CGGCGGGTCT GCGCCTCCCA CCGGCTGCCC
CACGAAGGCG ACGCCACCCA ACTGTTTGAA GGGTTTCTGG ACGGCTTTGA GCGTCAGAAA
CAGACAGTGT TCGCGCTGCT GGGAAAAGAG GGGAAAACCC TGGAAGAAAT GGTGGCGCAT
TCGCCTTTTT ACAAGAACCG GTTTCCCGAC CGGATCATTC AGCACACCTT TGAGGAGCAG
ATGATCGCTA AACTCCTGGC CCTGCTGGAA GAAGAGGGCC GGGTGATACA GGACCACGGC
CGGTTTATGC CGGCGGCGTA G
|
|---|
| Protein sequence | MKRTMTQHPR MLRIADHLYL VRAPAKGRFP FCHGFLFCGG GQTLMIDAGL GPELTQEIDR
LCRIDILVIS HSHPDHILNW HLLEDRTLLL PRQTPDSVTD LDRLGVRYTG TPERGAHWVN
AIGRPLGLRP FRKPDGRFDN GHIFALGPAR IEAIHAPGHL DDHYCFFDHG SGTLITTDID
FSGFGPWYGN PEGAIKPFQE SIRRLMELPY RRVCASHRLP HEGDATQLFE GFLDGFERQK
QTVFALLGKE GKTLEEMVAH SPFYKNRFPD RIIQHTFEEQ MIAKLLALLE EEGRVIQDHG
RFMPAA
|
|---|
| |