| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1426 |
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| Symbol | |
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| ID | 5694262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1698381 |
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| End bp | 1699322 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641264020 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001529307 |
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| Protein GI | 158521437 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGT TGACGGTTGC ATTGATCTGC GGCGGTGTCT CCTCGGAGCG GGACGTGTCT
CTGGCCGGTG GAAAGATGAT TCAGGCGGCC CTGGACCCGG CCCGGTACCG CGTGCTTCGA
TATGATTCCA GAACCGACCT GGCCCGGCTG GTGCAGGAAG CGCCGGGCAT TGACACCGCC
TTTGTCAACC TGCACGGCGT GCATGGAGAA GACGGCACCA TTCAGGGGCT CCTGGATTTG
CTGGGTGTCC CCTACCAGTG TTCCGGCGTG CTGGGCAGCG CCCTTGCCAT GAATAAGCTC
GCGGCCAAGC GGGTTTATCA GCAGGCCGGC CTGCCGGTGC CGCCCTATCG GGTGGTTTCT
GAAAACCGGG ACGCCGATGG GTCTTTTCTT GACGCCCATG CCGACGCGCT GGGGTTTCCC
CTGGTGGTCA AGCCCGCCTG CGGCGGTTCG AGCATCGGCA TGTCCATTGT AAAACAGGTT
TCCGAACTGG CCCCGGCCGT GGACAAGGCC CTGGCCCATG GGCCGGATGT GCTGCTGGAG
GCCTATATCC AGGGCCGGGA ACTCACCGGC GGCGTGATCG GCAATGACGA TCCCGAGCCG
TTGCCGGTGG TGGAAATCAT TCCCGGTGAC GGGTATGGTT TTTTTGATTA CGAGGCCAAG
TACACGCCCG GCGCCACCTC GGAGATATGC CCGGCCCCTG TGCCCGAGGA CCTTTCCGCC
AGGGTGCGGG ACTACGCGTG CCGGGCCCAC AGTGCTTTGT TCTGCAAGGG CTACAGCCGG
ACCGACATGA TCGCCACTGA CACGGACCTG TTTGTTCTTG AAACCAACAC CATTCCGGGG
ATGGGCCCCA CCAGCCTGCT GCCCCTGGCG GCAAAAGCGG CGGGCATGGC TTTCGGTGAT
CTGCTGGACC GGCTGATCAG CCTGAGCCTG GAAAAGCGCT GA
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| Protein sequence | MSKLTVALIC GGVSSERDVS LAGGKMIQAA LDPARYRVLR YDSRTDLARL VQEAPGIDTA
FVNLHGVHGE DGTIQGLLDL LGVPYQCSGV LGSALAMNKL AAKRVYQQAG LPVPPYRVVS
ENRDADGSFL DAHADALGFP LVVKPACGGS SIGMSIVKQV SELAPAVDKA LAHGPDVLLE
AYIQGRELTG GVIGNDDPEP LPVVEIIPGD GYGFFDYEAK YTPGATSEIC PAPVPEDLSA
RVRDYACRAH SALFCKGYSR TDMIATDTDL FVLETNTIPG MGPTSLLPLA AKAAGMAFGD
LLDRLISLSL EKR
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