Gene Dole_1424 details

Gene Information

• Locus tag: Dole_1424
• ID: 5694259
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 1695812
• End bp: 1697719
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641264017
• Product: Zinc finger-domain-containing protein
• Protein accession: YP_001529305
• Protein GI: 158521435
• COG category: [R] General function prediction only
• COG ID: [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain
• TIGRFAM ID: [TIGR02098] MJ0042 family finger-like domain

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0877101
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCATTA CCTGCGAACA GTGCGGTGTC AATTTTAAGC TGGATGACAG TCTTATAAAA 
CCCCAGGGGT CAAAGGTACG ATGTTCAAAG TGCAAGCACG TTTTTCGGGC CTACCCCCCG 
CCCCCGGAGC CTGCGCCTGT TCAGCCGCCG CCGGCGAAAA AGTCGCCGAA GCCCACGGCA 
GAACCGGCAC CGGAAGCGCC GGTAAAAGCA TCCAAACCTG AAGCAAAGCC CCCCCCGCCT 
GAGACCAAAG AGGTGTCTGA TTTTTCCCTG GACGAAGAGG ACCATGGGCC TGAGCCGGAC 
GAGGATCTGG ATCTGGGATT GGACGAGGAC CTGGACCTGG GAGAGGATCT GGACCTGGGG 
TTGGACGAGG ATCTCGACCT GGGTCCGGGC GAGGATCTGG ATTTGGGGCT GGAAGAGGAT 
GCCGGGGCCG GGGCATCTGA CGTATCCGCC GCATCGGACG ATTTCGAACT CTCCATTGAC 
GATGACGAGG ACCACGGGCT TGACGATGAT GACGCCGATA CATCCGACGA AGCTGATGAA 
GGGGATCTGG ACCTGGACTT TGATGAAACC GGTGAGGACA AAGCGGCCGA CGACCAGGAG 
GAGGATTTCG GCCTGGCCCT GGACGACGAC GAAGACCAGC CCGTGGCGGA TGATGAGGAT 
GAGGCAGATC TGGCCCTGGA TTTTGATGAC GATGACCTGG GGTTGGGAAG TGATGATCTT 
GAACTGGATG AACTGGAGGA CGTCAGCGAG GCGACCCCCA CGGCAAGCTC CGATGATTTT 
GAACTTGAAC TGGATGATGA CGACGCGCCA CCCGAGGAGG ATCTCGACTT TTCTGAGGTA 
GACAGCCTGC TGGAGGGCGA TGATGACACA TCGGTGGCCG ACACCGTGGA GCTTTCCGCC 
GATGAACTGA ACCTGGACCT GGACGACGAT ATCGATGGTG CCGATCCCAT TGAGCAGCAG 
GAGATCGACC TGGCCGACCT GGAGCAGACC ATTGAAATGG AGCTGCTGGA GCCCGAAGAC 
GAGGATGAGG AGGAGCAGGA GGAACCCGAA GACGTGGAAC TGGCCCTGTC CGATGAGGGG 
CAGGACATGG ATGACGATAT TGATTTTTCC GATGCCGACG AGGATGATTT TTCCGATATA 
GAGCAGATGC TGGCATCGGA CGAGGACCAG GAAGACGGCG AACCGGCGGC GGCAGCGATG 
GAGACGGATG AAGCCGGGGC AGTGGCTGCT GATAAGAAGA AGGCCAAAAA AGACAAGAAG 
GCCAAAAAAC CGGAAAAAGC AAAGAAAGAA AAGAAAAAGA AGGAAAAGAA GGAAAAAACG 
GTTTCTGCCG GGGCAACCGG CGTTGGCAGG CGTGTACTGA AGGTGATCCT GGTGGTGCTG 
CTGGTGCTGG TCCTTATCGC CGGACTGACC GTGGGTGCTT ATTTCCTGGC TTCCAGCATG 
GGGGTCAGTG TGCCGCCCAT GGACAAGCTC CCGCTTATTG GGACCCTGCT GGGAAAGGGG 
AGCACGTCCA TCGCCGGAAC CGAGGTGGTG GTGGTTAAAA GCTCACTGCA GAACAATTTT 
GTCACCAATA CCCATGCGGG CAAACTGCTG ATCATCACCG GTTCCGTTAC CAACAAGTCC 
TCCGCGCCGC GGCGGTTCGT CAAAGTGACG GCATCCCTTG CTTCCCAGGG CACCCCCCTT 
GCCCGGGAGG TGTCGGCCTA CTGCGGCAAT ATATTGGCCT TTGAGGAGTT GTCCGAGCAG 
CCCATGGACG CCATTCAACA GCGGCTGGCC AACCCCTCCG GGGACAACAA CCAGAACGCC 
AATATTCGGG CCGGGGCAAC AGTCCCGTTT ATGATCGTCA TTTCCGATCT GCCGCCGGAC 
CTGGTCGGAT ATGAGGTCCA GGTCACGGAA GCATCCCCGA TGGCCTGA 

 

Protein sequence

MIITCEQCGV NFKLDDSLIK PQGSKVRCSK CKHVFRAYPP PPEPAPVQPP PAKKSPKPTA 
EPAPEAPVKA SKPEAKPPPP ETKEVSDFSL DEEDHGPEPD EDLDLGLDED LDLGEDLDLG 
LDEDLDLGPG EDLDLGLEED AGAGASDVSA ASDDFELSID DDEDHGLDDD DADTSDEADE 
GDLDLDFDET GEDKAADDQE EDFGLALDDD EDQPVADDED EADLALDFDD DDLGLGSDDL 
ELDELEDVSE ATPTASSDDF ELELDDDDAP PEEDLDFSEV DSLLEGDDDT SVADTVELSA 
DELNLDLDDD IDGADPIEQQ EIDLADLEQT IEMELLEPED EDEEEQEEPE DVELALSDEG 
QDMDDDIDFS DADEDDFSDI EQMLASDEDQ EDGEPAAAAM ETDEAGAVAA DKKKAKKDKK 
AKKPEKAKKE KKKKEKKEKT VSAGATGVGR RVLKVILVVL LVLVLIAGLT VGAYFLASSM 
GVSVPPMDKL PLIGTLLGKG STSIAGTEVV VVKSSLQNNF VTNTHAGKLL IITGSVTNKS 
SAPRRFVKVT ASLASQGTPL AREVSAYCGN ILAFEELSEQ PMDAIQQRLA NPSGDNNQNA 
NIRAGATVPF MIVISDLPPD LVGYEVQVTE ASPMA