Gene Dole_1423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1423 
Symbol 
ID5694258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1695253 
End bp1695786 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content53% 
IMG OID641264016 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_001529304 
Protein GI158521434 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0177502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATGC CTGAACTGGT TCCCGTACTG TCGGCGCAGC AGGTTGAAGA GATCGTGGTT 
GCTCTTGGGC AAAGGATTTC ATCGGATTTT GGGGAGAAGG GGGGCGTTGC CGTCTGTGTG
CTCAAGGGGG CCTTTGTTTT TTTTGCCGAC CTCATTCGAA CCCTCACCAT ACCGGTTGAA
GTGGACTTTG TGGGTGTTGC CAGTTATGGC GCGCAGACAG AATCTTCCGG CAATATTGAG
TTAACAAAGC CGATTGAGTC TGATATAACA GGCAGACAGG TGCTGGTGGT GGAAGACATT
GTGGATACCG GCGCCACAGC GCGGTTTTTG CTGGATTATC TGGGTGGGTT TGAACCGGCT
CGAATAAACC TGTGCGCCTT TTTGGATAAA CGGGAACGAC GGAACCATGC CGTGCGGGTA
GATTACAGCG GCCATGTTGT CAGGGACGGT TTTCTTGTGG GGTACGGACT GGACTGGAAC
GGGTGCTATC GGAATCTGAA GGGGATCCAT CGCCTGGAAC AAAACAACCC CTGA
 
Protein sequence
MSMPELVPVL SAQQVEEIVV ALGQRISSDF GEKGGVAVCV LKGAFVFFAD LIRTLTIPVE 
VDFVGVASYG AQTESSGNIE LTKPIESDIT GRQVLVVEDI VDTGATARFL LDYLGGFEPA
RINLCAFLDK RERRNHAVRV DYSGHVVRDG FLVGYGLDWN GCYRNLKGIH RLEQNNP