Gene Dole_1411 details

Gene Information

• Locus tag: Dole_1411
• ID: 5694246
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 1677887
• End bp: 1680013
• Gene Length: 2127 bp
• Protein Length: 708 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641264004
• Product: TPR repeat-containing protein
• Protein accession: YP_001529292
• Protein GI: 158521422

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000178962
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCATC TACCGGACAA TTCATCTAAA ACAATCTTTA CCATCAGCGG CATTCTTGTT 
TTTGTCCTGA TCCTCTATGG CAATACCTTT CACGGCGACT TTGTGTTTGA CGATGTGCCC 
AACATTGTTG ACCGGGCCGA CCTGCACATG GAGGGCCTGT CCCTGCCGGC CGTTCTCGAC 
GCCTGTACTA TGGGAAAAGA CGGCGCGTCC TATGTTCACC GGCCGGTGAG CAACCTCTCT 
TTTGCCCTGA ACCACTGGGT CGGCGGGCTG CGACCGGCCG GCTATCATGT GGTCAACCTG 
CTGATTCACC TGGTGGCCAC GCTGTTTGTT TTCAAGGCCA TTCTGCTGCT GCTGGAAATT 
GGAAAGGTCC CTCGACCTTG GGCAGACCGC CTGCTGATCG CGGGGGTGGC CACCCTGCTG 
TGGGCCGCCC ACCCCATGCA GATCCAGGCT GTAACCTATA TCGTTCAGCG CATGGCCTCT 
CTTGCCGCCA TGTTTTACGT TGTCGGGATC TGGGCCTGGC TGAAATTTCG TATTGCTTCG 
GCCGGCGCTG ACAGCCGGCG GCCCTGGGGA TTTGCGTTTC TGGCCCTGGT GACGGTGGCC 
CTGGCCCTGG GGTCCAAGGA GAATGCGGCC CTGTTTCCGG CAGCTCTCCT GCTGGTGGAG 
GCCTGCTTTT TTGACGCGGC CTGGCTGCGC CGTCTTTTTG TCCGCCCTGT GGTCCCGGTT 
GCCATTGTTC TGGCAGCCGT CGTTGGCATT GGCATCTGGC TCTTCTCCAC CTCCCTGCTG 
AATGGATACG TGGACCGGCC CTTTGGACTA AAGGAGCGGC TGCTCACTGA GCCTCGAATT 
CTTTTTTTCT ATCTCTACCA GTTTTTAGCG CCGGTGCCGG AAAATTTTTC CATTGATCAC 
GATTTTACCC TTTCCACGTC TTTTGTTCAC CCGGTCACCA CGCTGCTGTC TGTGGCCGGG 
ATTCTCGGCA TGCTGGCGGC GGCCCTTGTC TACAGAAAAA AATATCCCCT GGCCTGTTTT 
GCCGTGCTGT TTTATTTTGT CCACCACCTG ATAGAGTCCA CGGTCCTGCC TCTTGAGCTG 
GTATTTGAAC ACAGAAACTA CCTGCCTTCC ATGTTTTTGT TTCTTCCCGT GGCCCTGGGC 
CTTAACCGGC TTCTGGCCAT TTATCGGCAA CGAAGCCGGT TTATCTATTA TACTATTGCC 
GGGGTGGCTG CCTTTGGCTT TCTGTTTCTG GGCATATGCA CTTATGTGCG AAACTACGAC 
TGGCAATCTC CTGAATCCCT GTGGCAAAGC GCTATCGTAA AAGCCCCGGA CCTGACCCGG 
CCTTACCATA ACCTGGCCTG GTTTTACGAG CGAACCGGAG ACACGGACAA GGCCCTGGCC 
CTCTATACAG TGGCCCTTGA AAAAAAGGTC CACGACAAGC GCCTGAAAAA GACCCGGACT 
TTGGAAAACA TGGCCGGTAT CTACTACCAG CGCGGGAATT TTGAAAAGGC GCAAAACTGC 
ATGGCCGAGG CCCTGGCCCT GGTAAAGGCC AAAGGCCGGG ACACGGGCCT TTCCCGCCGA 
ATGGAGCGGT ACTATATGTT CAAGCTCTGC CTGATTTATG CCCGCACGGA TCCTTCCCGC 
GCCCTTGACA TGGCAGATCA CCTGCTGGCT GAACCAGCCG TCGGGCCGGC CACGAAGTCC 
CGGCTTTTTG CTTTGCGGGC AAGGATTCTG CTGGCGCAAA ACCATTCAAA TGCGGCCCTG 
GCCGAACTGC AACAGGCCCT GGCCCTGGCC CCGGACAAGA CAGACCTTTT TCTGCCCCTG 
GGCGTGGCAT TCGGGTTCCT GGAAGAGAGC AAAAAAGGCG AGTGGTTTTT CAGGCAATAC 
ATGGCCGGCC GTCCGGATTC AGGGGCCGGG TGGCTTTATC TTGCCGAAAA CCGGCTTCTG 
GCCGGCGATA CGAAAAGTGC CCGGCGCTGC ATGGCAGCAT TTATAGCAAC CCGGCCCTTG 
ACACAAATCA ACAAACAGAT CAAAGATATT GAGACCGGCA ACCCGGATCT GCCGCCACTG 
ATGGCGCCGG CCCAATCCCT TGAACTGCTG GGCCAGGTGG TGAGGACCGG TATTGACCGG 
CAGAAAGGCA TACCATGTAT CCCGTGA 

 

Protein sequence

MTHLPDNSSK TIFTISGILV FVLILYGNTF HGDFVFDDVP NIVDRADLHM EGLSLPAVLD 
ACTMGKDGAS YVHRPVSNLS FALNHWVGGL RPAGYHVVNL LIHLVATLFV FKAILLLLEI 
GKVPRPWADR LLIAGVATLL WAAHPMQIQA VTYIVQRMAS LAAMFYVVGI WAWLKFRIAS 
AGADSRRPWG FAFLALVTVA LALGSKENAA LFPAALLLVE ACFFDAAWLR RLFVRPVVPV 
AIVLAAVVGI GIWLFSTSLL NGYVDRPFGL KERLLTEPRI LFFYLYQFLA PVPENFSIDH 
DFTLSTSFVH PVTTLLSVAG ILGMLAAALV YRKKYPLACF AVLFYFVHHL IESTVLPLEL 
VFEHRNYLPS MFLFLPVALG LNRLLAIYRQ RSRFIYYTIA GVAAFGFLFL GICTYVRNYD 
WQSPESLWQS AIVKAPDLTR PYHNLAWFYE RTGDTDKALA LYTVALEKKV HDKRLKKTRT 
LENMAGIYYQ RGNFEKAQNC MAEALALVKA KGRDTGLSRR MERYYMFKLC LIYARTDPSR 
ALDMADHLLA EPAVGPATKS RLFALRARIL LAQNHSNAAL AELQQALALA PDKTDLFLPL 
GVAFGFLEES KKGEWFFRQY MAGRPDSGAG WLYLAENRLL AGDTKSARRC MAAFIATRPL 
TQINKQIKDI ETGNPDLPPL MAPAQSLELL GQVVRTGIDR QKGIPCIP