Gene Dole_1410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1410 
Symbol 
ID5694245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1677292 
End bp1677705 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content49% 
IMG OID641264003 
Producthypothetical protein 
Protein accessionYP_001529291 
Protein GI158521421 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000260045 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TTGAAAAAAA ACTTTTGGGC AACCAGGGCG GGTTTACCCT GATTGAAATC 
ATTGCCGTGC TCGTGATCCT GGGTATTCTG GCTGCTGTGG CCGTGCCCAA GTTCATGGAC
CTGACCGATG ATGCCAATGA AAAGGCCTTT GAGGGCGCTG CGGCCGCGGC CTTTTCCAAC
GCCACGCTTT CTTATTCTCG CTTTGTGCTG AGAAACGACG CGGCACCGAA CAATATTAAT
AACACACCGG CATGGACTGA CGGAACCAAC AGCGTTACCA TTGAGGACGA GCTTGGGGAT
TATACGATTG ACAGTATAAG TTATAACGGC TCAGCCACCC CTCCCGTGCT GAGAATAACT
GTAGAGAAGA CGGAAACTTC TGTAACCTTC ACCAAATCCT TCAACCTGCC ATAA
 
Protein sequence
MKKFEKKLLG NQGGFTLIEI IAVLVILGIL AAVAVPKFMD LTDDANEKAF EGAAAAAFSN 
ATLSYSRFVL RNDAAPNNIN NTPAWTDGTN SVTIEDELGD YTIDSISYNG SATPPVLRIT
VEKTETSVTF TKSFNLP