Gene Dole_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1380 
Symbol 
ID5694214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand- 
Start bp1642234 
End bp1642938 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content51% 
IMG OID641263972 
Producthypothetical protein 
Protein accessionYP_001529261 
Protein GI158521391 
COG category[R] General function prediction only 
COG ID[COG3910] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCATC ACATCACCCG TGTTACACTG CACCATGAAA CGTACCCGTC TGATTGTCAC 
TACCCCTTCT CACTGCCGAT CTTCCGGCAG ACCCGGCAAA TCCGGTTCGA ATCCCCGGTA 
ACGTTTTTCG TGGGCGAGAA CGGCACGGGA AAGTCCACCC TGCTGGAGGC ACTGGCCCTT 
GCGGGGGGCA TTCATATCTG GCGCAACTGT GAAGGCGCGC GCTACCAAGT CAACCCCTAT 
GAAACGCAAT TACACAGATA TATCTCCCTG GAGTGGGCAA ATGGAAAAGT GCCGGGATCG 
TATTTCGGTT CAGAAATTTT TAACGACTTT AGAAGAACCG TAGACAACTG GGCGGCCGCA 
GACCCCGGGC AACTGAAATA TTTTGGCGGC AAATCGTTGA TTACACAATC CCACGGCCAG 
TCCATGATGG CCTATTTTGA CGCCTGCTAT AAAAGAAAGG GCGTCCACTT TCTGGATGAA 
CCGGAAACCG CCCTGTCGCC TAAAAGTCAG CTCGCACTGC TGAACATTCT TCGCAAAAAC 
GGCAAAGCGG GCCATGCCCA GTTTATCATA GCCACACACT CCCCGATTCT GCTGGCCTGT 
GAAAATGCGT CGATCTACAG TTTTGACCGC AGCCCGGTAA GCATCATCGC ATACCGGGAA 
ACCGAGCATT ACAAAATATA CAAAAATTTT CTTCTCGAGC GATAA
 
Protein sequence
MNHHITRVTL HHETYPSDCH YPFSLPIFRQ TRQIRFESPV TFFVGENGTG KSTLLEALAL 
AGGIHIWRNC EGARYQVNPY ETQLHRYISL EWANGKVPGS YFGSEIFNDF RRTVDNWAAA 
DPGQLKYFGG KSLITQSHGQ SMMAYFDACY KRKGVHFLDE PETALSPKSQ LALLNILRKN 
GKAGHAQFII ATHSPILLAC ENASIYSFDR SPVSIIAYRE TEHYKIYKNF LLER