| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1377 |
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| Symbol | |
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| ID | 5694211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | - |
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| Start bp | 1640362 |
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| End bp | 1641468 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641263969 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001529258 |
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| Protein GI | 158521388 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGGAA AAGACTACAA CCTCACCGAC TCGTTTTTCA TCCGTACCCT TCTGCGAATC
GGCAGCCCGT CGCTGCTGGC GCCGGACGAG CGACGCAAGC GGGTGTCAGC CGTTTTTGTG
GTGCTGGTGA GTATCCTGAT CACCTCCACC TTCTCCGTTT ACCATCTTTT CTCCGGCCAC
TACCAGGTGG TAGCCATGGA CAGCCTGGGT TTTGTCGTGG CCCTGTACGG ACTGCGGTAT
CTTCGACGAC ACGAAAACGG CGATTCCATC TACCTGGGGA TCGGCTTCGG CGTTTTCGTG
CTGTGCAGCA CCACGACCAT TATCGGCCGA ACCGAAATAT CCTATTTCTT CTGGTCCTTC
ATGCTGCCGC CCGTTCTCTT TTCCATTCTG GGAGACCGGA GGGGGATGAT TGCGAGCCTC
TTTTTTTTCT GCCTGAGCCT GATCCTGATG ACCCTGCCCG AAACCGTTCT TCCTTCACCG
CCCTACTCCA CCCATATCGT GGCCCGCTAC AGCGTCATCT ACGTGGTCCT CACCCTCTCC
GTTTACTATT ACGAAACCTC CCATCAAATG CTGATCCGGT ATATTCAGCG GGAAAAGGAC
CGGTTTGAAA GCGCGTCCAA GCGCGATCCC CTCACCGGCC TGGCCAACCG CAGGGACATC
TCCGAACGGA TGGAAAACGA GCGAGAGCGG CAGGCCCGGT CCGGCAGACC CTTTGCCCTG
ATTCTCGGCG ACATCGACAA CTTCAAACAG TTAAACGACA CCCATGGCCA TGACTGCGGC
GATGATGTGC TCAAACGGGT GGCAGGACTG ATGAAAAACC AGGTCCGTGG CATAGACTGT
CCCTCCCGGT GGGGCGGTGA GGAGTTTCTC ATCCTGCTGG TGGAGAGCGA CCGGGAAGGA
GCTTACACGG TTGCCGGGCG CATTCGCGAA AAGATCCAAA ACACGGATTT CACCTTCAAA
AAAGAGAAGA TGGCCGTTAC CATGACCTTT GGCCTGAGCG TGTTCAACGG CGGGGACGAT
ACGGTTGAAA AATGCATCAA GCGGGCCGAC CAGGCCCTTT ATGACGGCAA GCACCAGGGG
AAGAACAGGG TAGTAGTTGC CGACTGA
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| Protein sequence | MTGKDYNLTD SFFIRTLLRI GSPSLLAPDE RRKRVSAVFV VLVSILITST FSVYHLFSGH
YQVVAMDSLG FVVALYGLRY LRRHENGDSI YLGIGFGVFV LCSTTTIIGR TEISYFFWSF
MLPPVLFSIL GDRRGMIASL FFFCLSLILM TLPETVLPSP PYSTHIVARY SVIYVVLTLS
VYYYETSHQM LIRYIQREKD RFESASKRDP LTGLANRRDI SERMENERER QARSGRPFAL
ILGDIDNFKQ LNDTHGHDCG DDVLKRVAGL MKNQVRGIDC PSRWGGEEFL ILLVESDREG
AYTVAGRIRE KIQNTDFTFK KEKMAVTMTF GLSVFNGGDD TVEKCIKRAD QALYDGKHQG
KNRVVVAD
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