Gene Dole_1373 details

Gene Information

• Locus tag: Dole_1373
• ID: 5694207
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 1633634
• End bp: 1635541
• Gene Length: 1908 bp
• Protein Length: 635 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 641263965
• Product: hypothetical protein
• Protein accession: YP_001529254
• Protein GI: 158521384
• COG category: [S] Function unknown
• COG ID: [COG1944] Uncharacterized conserved protein
• TIGRFAM ID: [TIGR00702] uncharacterized domain

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000799529
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCCCAC CGGTCTGTTC CACTGCTCGG TATTATCTGG AACGGCATCT CTCTCTGGGT 
GACCACCACA GTGGCCATCA AGGCCCATGC CGCCACCCCC TGGCCGGCAG CCGCCGCAGG 
CATCATCCTG CTGGCCATCG CATATTGTCT TTCTCCCGGC ACGGCGCAAA TCGACGGGTT 
AAAGAAGGCC TCGTTTTGGA AAACAGAAAA ATAACCTATA CCTTAACCAG GGAATCGACC 
CGGCTGCAGA CCGGCTTTTT TGTGACCCGG CCGAATGAGG CGCTGGCCCT GGAAGAGTGC 
CTCGCCCTGC TCAGGTTGCG TCCCATGGAT GATTTTTTGC ACCAGCACGT GTTGACCCTG 
GTCGGCAGAC TGCCAAAGGA CAGGCTGCGG CAGTTCCTCA ACCGATGTAA GGCAGGCAGT 
GATCCGGTAT GCCGGGCCCT TGCGGCGGAA TATCTTTTTT TAACCAGAGG GCGGGAGCAT 
CTGGAAAAAC GGTTTACCGC GGAAGATATT CGCGAACTGT GCCGGCATAC GCCCTTGATC 
TATCTGCGCT CTTTTTTGGA GCCGGACCAG GCGCTTCATG GCCGGTGGAT CGCTTTTTTT 
CGAAATAACA TGCAGGCGCA TCAGCCGCTG GCATCACCGG ATCAAACAGA CCTGCCCCTG 
TTGACGTTCG ACAAGGCCCC GGCGCGGACA GCGGCCACTC TTGCCGGACT GGCGCAAGCC 
ATGACCGGAA AAGGGGTGGC AGCCACACCG GCGGTCTCTC CCGAACAGAC AGCCGACACG 
GCCGAAGACC GCCTGAAAAA GGCCGGGGTT GAACTGGGCC GGCTCATGCG CCACGAGTCC 
AGCCTGAGCC CCATCGGCCT GTTGCGGAGC TGGCGATTTG CCACCCATAT TGAAAACAGG 
CGCAACCAAT TGTCTCTTTC CGGTGAGCAG ACCAGCTACG GACGGGGGCT GACCCTGAAC 
GCGGCCCGGG CCTCGCTGAT GATGGAGATC GTGGAGCGCT GCTCGGCCTT TGCCTCGGTC 
TCGGCCAACG GGCTGGAAAA TTTTCGGTAT TCATATCCCT TGCGTTACGC GCCCTTCAGT 
GAACTGGCGG CCGGCGAGGC GGCGGTCATG AATCCGGCGG ACCTGGCCCT GGAGGTGTCA 
TACCCGGACC AGGGCCTGCA CTGGGTGCAG GGTGAAACCC CGGCACCGGG GGGCGACGGC 
GACCCCCGCC GGTCCATATG GATACCGGCC CAATGTCTGT TTCTGTTCTG CAACCTGGAT 
GAGCCGTCCC TGTTTTCCGG GCTTGGCTCC ACCGGCCTGG CATCGGGCAA CACCCTGGCC 
CAGGCAAAAG TCTCGGCCCT GTTGGAGATT GTCGAACGCC ACCAGGCCGC CACCGTGCCC 
TATGACCGGT CCACCTGTTT TCATCTGGTA TCCCGGGAGC CCCGGATGGC CGGGCTTCTT 
GAGGCTTACC ACCAGGCCGG CGTGAACCTC TGGTTTCAGG ACATTACCCC GAAAAACGGG 
ATTCCCTGCT GCCGCTGCTT TGTGAAGGAA AAAGGCGGGC AAATCCATAC CGGCGCGGCG 
GCCCACTTGG ATGCCCGGCG AGCCATTGTC TCCGCCATCA CGGAGACCAC CTGCCCGTTT 
CCCAAATCAC CGCCCACGCA ACCCGTGCCG CCCGGCCTGA CCCTGGTGGG GTATGAGAAC 
CTGCCCGACT ATTCCACGGG TGACGCAGCC TCGGACCTGG CGCTGCTGGA GACGCTGTTT 
TTACAAAACA GCTTTCAACC CTGCTACGTT GACCTGACCC GCGCGGACAT CGGCCTGCCG 
GTGGTCAAGG CCGTTGTGCC GGGCATGGAG GTGCTGGGGG ACTTTGATGA CTACTCTCGG 
GTTCATCCGG AGCTGTATCA GAATTACCTG TCCGTGTATG ATTCTTAA 

 

Protein sequence

MGPPVCSTAR YYLERHLSLG DHHSGHQGPC RHPLAGSRRR HHPAGHRILS FSRHGANRRV 
KEGLVLENRK ITYTLTREST RLQTGFFVTR PNEALALEEC LALLRLRPMD DFLHQHVLTL 
VGRLPKDRLR QFLNRCKAGS DPVCRALAAE YLFLTRGREH LEKRFTAEDI RELCRHTPLI 
YLRSFLEPDQ ALHGRWIAFF RNNMQAHQPL ASPDQTDLPL LTFDKAPART AATLAGLAQA 
MTGKGVAATP AVSPEQTADT AEDRLKKAGV ELGRLMRHES SLSPIGLLRS WRFATHIENR 
RNQLSLSGEQ TSYGRGLTLN AARASLMMEI VERCSAFASV SANGLENFRY SYPLRYAPFS 
ELAAGEAAVM NPADLALEVS YPDQGLHWVQ GETPAPGGDG DPRRSIWIPA QCLFLFCNLD 
EPSLFSGLGS TGLASGNTLA QAKVSALLEI VERHQAATVP YDRSTCFHLV SREPRMAGLL 
EAYHQAGVNL WFQDITPKNG IPCCRCFVKE KGGQIHTGAA AHLDARRAIV SAITETTCPF 
PKSPPTQPVP PGLTLVGYEN LPDYSTGDAA SDLALLETLF LQNSFQPCYV DLTRADIGLP 
VVKAVVPGME VLGDFDDYSR VHPELYQNYL SVYDS