Gene Dole_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDole_1356 
Symbol 
ID5694190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfococcus oleovorans Hxd3 
KingdomBacteria 
Replicon accessionNC_009943 
Strand
Start bp1615010 
End bp1616785 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content55% 
IMG OID641263948 
Producthistidine kinase 
Protein accessionYP_001529237 
Protein GI158521367 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.272397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCAATG AAAGTGAGGC GGAAGTGGAA CCAACAACAG ACGTTGCCAG ACGGGAGACA 
GGCGTTTCGG CGAGACCTGC CGGTAAACAG TCCGATGCCT ACTATTTTCA GTTGACCCGG
CGACTGATAC TGACGGTCAT CGTGGTCTCC TTTACGCCCA TGATCATGGT CATCGCCATT
CTCCTGCACC AGTTTCACGC CTCCTATCAT GAAAAGACCT ACGCCCACCT AAACGAGGTG
GTGCTGAAAC ACAAGCAGAA CATCGACACC TTCCTGAAGG AAAAGCTGGC CAATATCCAT
GAATTGACCA TCACCACCCC GGTGATGACC CTGTCGGACA AGATGCTGCT GGAGAGGGAG
TTGCAGAACC TGAAGACCGC CTATGGCGAT GTGTTTGTTG ACCTGGGCGT GGTGGACGCG
GCCGGCCGGC AGGCCACCTA TGCCGGTCCC TACCAGCTGG ATAATGCCTT TTACGGAAAT
GCCGCGTGGT TCCAGAAGGC GATCTCTCAA TTTTACTACG TCAGTGACGT GTTCATGGGG
CTTCGGGGAA GCCCCCATTT TATTATTACC GTGCGGCGAT ACATCAACGA CGTTCCCTGG
GTGGTCCGGG CCACCATTGA TTTCAAGGCG TTTAACACCC TGGTGGAAAA CCTGCGGCTG
GGCCGTACCG GGTTTGCCTT TATCATCAAC CGCAACGGCG AATTCCAGAC CCGTCCCCCC
ATGGGCGGAC TGTCGGAAGA CATTCGCTAT GAGGAGATAA CCTCCCGGCT GTCGCGGTCT
CATGAAAAGG TTTTGATATT TGAGCAAGAA GACACATCCG GGAGTGAAAA TATTTACGCG
GTGGCCGGCC TGAAGGACAA CAACTGGCTT CTGGTGCTCA GGCAGGAAAA ACAGGACGCT
TTTGCCGAGT TCAACCGCAT GGCACAGATC GCCGGACTGA TTTTTGCCCT TGGCGGCATG
GGCATCATCA TCATGGCCGT GGTTCTGTCC CGGCGCATGG TGCGCCGGAT TCAGAAGGCG
GACAGTGAAA CACAGACCTT AAACCAGCAG GTGATCGAAA CCGGCAAGCT GGCCTCGGTG
GGAGAACTGG CCGCCGGCAT TGCCCATGAA ATAAACAATC CCGTGGCCAT CATGGTGGAG
GAGGCGGGAT GGATCGGGGA CCTTCTGGAC GAAGAAGAGT TTTCGGAAAA CGCCAATCTA
GAGGAGATGC GCCGGGCCAT TACACAGATC GGCACCCAGG GCAGGCGCTG CAAGGAGATC
ACCCATAAAT TGCTGAGTTT TGCCCGCAAA ACCGACTCCA CCATCAAGGA TGTGCAGCTC
AATGAGCTGA TTTCCGAAAT TGTTCAGCTC TCCGGCCAGA TGGCCAAATC CAGCAAGATC
ACCATCACCA CGGATCTGAC CCCGGACCTG CCCTATGTGA CCCTGTCACC GTCGGAAATG
CAGCAGGTGA TGCTCAACCT GATCAACAAT GCCATGGACG CCATGGAAAA GACCGGGGGC
GCGATTCATA TCTCAACCAA GATGAGCAAA CTGGAAAAAG ACCATATTGT GATCATTGTG
GAGGATACCG GCCCCGGCAT TCCGGAGGCC AACCTGCCGT TTATTTTCAA CCCCTTTTTT
ACCACCAAGC CGGTGGGCAA GGGGACCGGG CTGGGGCTTT CCATCTGCTA CGGGATTGTT
GAAAAGATGG GGGGTAAGAT TGATGTGACC AGCAAGGTAG GGGAGGGGAC CCGGTTCCGG
GTGTGGATTC CCTACCAGCA GCCGGAACCG AAGTAG
 
Protein sequence
MRNESEAEVE PTTDVARRET GVSARPAGKQ SDAYYFQLTR RLILTVIVVS FTPMIMVIAI 
LLHQFHASYH EKTYAHLNEV VLKHKQNIDT FLKEKLANIH ELTITTPVMT LSDKMLLERE
LQNLKTAYGD VFVDLGVVDA AGRQATYAGP YQLDNAFYGN AAWFQKAISQ FYYVSDVFMG
LRGSPHFIIT VRRYINDVPW VVRATIDFKA FNTLVENLRL GRTGFAFIIN RNGEFQTRPP
MGGLSEDIRY EEITSRLSRS HEKVLIFEQE DTSGSENIYA VAGLKDNNWL LVLRQEKQDA
FAEFNRMAQI AGLIFALGGM GIIIMAVVLS RRMVRRIQKA DSETQTLNQQ VIETGKLASV
GELAAGIAHE INNPVAIMVE EAGWIGDLLD EEEFSENANL EEMRRAITQI GTQGRRCKEI
THKLLSFARK TDSTIKDVQL NELISEIVQL SGQMAKSSKI TITTDLTPDL PYVTLSPSEM
QQVMLNLINN AMDAMEKTGG AIHISTKMSK LEKDHIVIIV EDTGPGIPEA NLPFIFNPFF
TTKPVGKGTG LGLSICYGIV EKMGGKIDVT SKVGEGTRFR VWIPYQQPEP K