Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dole_1356 |
Symbol | |
ID | 5694190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfococcus oleovorans Hxd3 |
Kingdom | Bacteria |
Replicon accession | NC_009943 |
Strand | + |
Start bp | 1615010 |
End bp | 1616785 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641263948 |
Product | histidine kinase |
Protein accession | YP_001529237 |
Protein GI | 158521367 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.272397 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGCAATG AAAGTGAGGC GGAAGTGGAA CCAACAACAG ACGTTGCCAG ACGGGAGACA GGCGTTTCGG CGAGACCTGC CGGTAAACAG TCCGATGCCT ACTATTTTCA GTTGACCCGG CGACTGATAC TGACGGTCAT CGTGGTCTCC TTTACGCCCA TGATCATGGT CATCGCCATT CTCCTGCACC AGTTTCACGC CTCCTATCAT GAAAAGACCT ACGCCCACCT AAACGAGGTG GTGCTGAAAC ACAAGCAGAA CATCGACACC TTCCTGAAGG AAAAGCTGGC CAATATCCAT GAATTGACCA TCACCACCCC GGTGATGACC CTGTCGGACA AGATGCTGCT GGAGAGGGAG TTGCAGAACC TGAAGACCGC CTATGGCGAT GTGTTTGTTG ACCTGGGCGT GGTGGACGCG GCCGGCCGGC AGGCCACCTA TGCCGGTCCC TACCAGCTGG ATAATGCCTT TTACGGAAAT GCCGCGTGGT TCCAGAAGGC GATCTCTCAA TTTTACTACG TCAGTGACGT GTTCATGGGG CTTCGGGGAA GCCCCCATTT TATTATTACC GTGCGGCGAT ACATCAACGA CGTTCCCTGG GTGGTCCGGG CCACCATTGA TTTCAAGGCG TTTAACACCC TGGTGGAAAA CCTGCGGCTG GGCCGTACCG GGTTTGCCTT TATCATCAAC CGCAACGGCG AATTCCAGAC CCGTCCCCCC ATGGGCGGAC TGTCGGAAGA CATTCGCTAT GAGGAGATAA CCTCCCGGCT GTCGCGGTCT CATGAAAAGG TTTTGATATT TGAGCAAGAA GACACATCCG GGAGTGAAAA TATTTACGCG GTGGCCGGCC TGAAGGACAA CAACTGGCTT CTGGTGCTCA GGCAGGAAAA ACAGGACGCT TTTGCCGAGT TCAACCGCAT GGCACAGATC GCCGGACTGA TTTTTGCCCT TGGCGGCATG GGCATCATCA TCATGGCCGT GGTTCTGTCC CGGCGCATGG TGCGCCGGAT TCAGAAGGCG GACAGTGAAA CACAGACCTT AAACCAGCAG GTGATCGAAA CCGGCAAGCT GGCCTCGGTG GGAGAACTGG CCGCCGGCAT TGCCCATGAA ATAAACAATC CCGTGGCCAT CATGGTGGAG GAGGCGGGAT GGATCGGGGA CCTTCTGGAC GAAGAAGAGT TTTCGGAAAA CGCCAATCTA GAGGAGATGC GCCGGGCCAT TACACAGATC GGCACCCAGG GCAGGCGCTG CAAGGAGATC ACCCATAAAT TGCTGAGTTT TGCCCGCAAA ACCGACTCCA CCATCAAGGA TGTGCAGCTC AATGAGCTGA TTTCCGAAAT TGTTCAGCTC TCCGGCCAGA TGGCCAAATC CAGCAAGATC ACCATCACCA CGGATCTGAC CCCGGACCTG CCCTATGTGA CCCTGTCACC GTCGGAAATG CAGCAGGTGA TGCTCAACCT GATCAACAAT GCCATGGACG CCATGGAAAA GACCGGGGGC GCGATTCATA TCTCAACCAA GATGAGCAAA CTGGAAAAAG ACCATATTGT GATCATTGTG GAGGATACCG GCCCCGGCAT TCCGGAGGCC AACCTGCCGT TTATTTTCAA CCCCTTTTTT ACCACCAAGC CGGTGGGCAA GGGGACCGGG CTGGGGCTTT CCATCTGCTA CGGGATTGTT GAAAAGATGG GGGGTAAGAT TGATGTGACC AGCAAGGTAG GGGAGGGGAC CCGGTTCCGG GTGTGGATTC CCTACCAGCA GCCGGAACCG AAGTAG
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Protein sequence | MRNESEAEVE PTTDVARRET GVSARPAGKQ SDAYYFQLTR RLILTVIVVS FTPMIMVIAI LLHQFHASYH EKTYAHLNEV VLKHKQNIDT FLKEKLANIH ELTITTPVMT LSDKMLLERE LQNLKTAYGD VFVDLGVVDA AGRQATYAGP YQLDNAFYGN AAWFQKAISQ FYYVSDVFMG LRGSPHFIIT VRRYINDVPW VVRATIDFKA FNTLVENLRL GRTGFAFIIN RNGEFQTRPP MGGLSEDIRY EEITSRLSRS HEKVLIFEQE DTSGSENIYA VAGLKDNNWL LVLRQEKQDA FAEFNRMAQI AGLIFALGGM GIIIMAVVLS RRMVRRIQKA DSETQTLNQQ VIETGKLASV GELAAGIAHE INNPVAIMVE EAGWIGDLLD EEEFSENANL EEMRRAITQI GTQGRRCKEI THKLLSFARK TDSTIKDVQL NELISEIVQL SGQMAKSSKI TITTDLTPDL PYVTLSPSEM QQVMLNLINN AMDAMEKTGG AIHISTKMSK LEKDHIVIIV EDTGPGIPEA NLPFIFNPFF TTKPVGKGTG LGLSICYGIV EKMGGKIDVT SKVGEGTRFR VWIPYQQPEP K
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