| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1321 |
|---|
| Symbol | |
|---|
| ID | 5694155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 1574095 |
|---|
| End bp | 1574799 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641263913 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001529202 |
|---|
| Protein GI | 158521332 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0200617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACC GCATTCTTAT TATTGATGAT GACAAAGCCC TTCAGGCGCT GCTGCGCGAC
TATTTTGAGG AAAGCCATCT GGAGGTGGCG TTCGCGCTGA CGGGCCTGGA TGGAATAAAA
AGCGTGGCCG CCGGTACGCC CTGCGATATT GTTGTGCTTG ATATCATGCT GCCGGACATC
GACGGATTTG AGACACTGAA AAAAATCCGG GCGATCTCCC AGGTGCCGGT GATCATGCTC
ACCGCCAGAG AGGACCAGGC CGATCGCATT ATCGGCCTTG AGCTGGGGGC GGATGATTAT
ATGCACAAGC CCTTCAACCC CCGGGAACTG CTGGCCCGAA TAAAAGCGGT GTTGCGGCGG
GCAACGGCAA GCGCGGAAGC GGCCCCGGTA TCATCCCCCT CCGCCTGCGC CATGGTGTTC
GGCTCGGTTG AGATCGACTT TGCCGGCCGC GTATTGCGCA AGTCCGGCAG GGAGATTGCC
ATGACAGGGG TGGAGACCGA TATCCTCAAC GCCCTTATTT CACATAAAGG GACCCCGCTC
ACCCGGGACC GTCTGCTGGA CCTTGCCAGC GGGCGTGACT TTGAAACCTT TGACCGCTCC
ATTGACGTGC ATATCAGCCG CATTCGAAAA AAGCTGGAGG ATGACCCCTC CGCGCCCCGC
TATATCAAAA CCGTATGGGG GAAAGGGTAT ATGTGGGCCG AGTAA
|
|---|
| Protein sequence | MTHRILIIDD DKALQALLRD YFEESHLEVA FALTGLDGIK SVAAGTPCDI VVLDIMLPDI
DGFETLKKIR AISQVPVIML TAREDQADRI IGLELGADDY MHKPFNPREL LARIKAVLRR
ATASAEAAPV SSPSACAMVF GSVEIDFAGR VLRKSGREIA MTGVETDILN ALISHKGTPL
TRDRLLDLAS GRDFETFDRS IDVHISRIRK KLEDDPSAPR YIKTVWGKGY MWAE
|
|---|
| |