Gene Dole_1313 details

Gene Information

• Locus tag: Dole_1313
• ID: 5694148
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfococcus oleovorans Hxd3
• Kingdom: Bacteria
• Replicon accession: NC_009943
• Strand: +
• Start bp: 1566326
• End bp: 1567021
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 641263907
• Product: TetR family transcriptional regulator
• Protein accession: YP_001529196
• Protein GI: 158521326
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACAGA CAAAAAAGAA AGCAAAACCC AAGGTGCCGG TCGCCGCGGA AGAGACCGGC 
TCCAAAGGTG AGGCCACCCG GCAGAAAATC ATCGCCGCCG CCCGAAAGGT GTTTACCCGC 
CATCCCTACC ACGCCGCCAG CATCCGCATG ATCGGAGAGG AGGGCGGGTT TGACTACTCC 
ATCATTCACC ACTATTTCAC CAAGGCCGAG CTGTTCCGGG CCGTGGCGAG GCAGCTTTAT 
GAAGAGCTGG TCACGGCATA CCGGGAATGG ATCGACGGCG TGGAACACCT GACGCCCACG 
GAAGGCCTGA AGATTTACCT GGACCGGTCC CTGGATTACC TGTTTGAACA TCCCGATGTC 
ATGGAGGTGC TGACCCAGAA CGCCGGCCAC ATGAAGATCG ACCCCGACCC GCCGGGGTTT 
GATTTTTTCA CCCGCTACTT TCGGGAAATC GAGGCCATCT TTATTGAGAA AATCAGCGTC 
CTCACCATGC AGCCGGAACT GTCCATGTGG AGTTACACCA TGATGGCCCT TCACACGGCC 
TTTGTCGGCT CGGCCACCTA CCACGGCAAG GCCCTGGGCA TGGATCCGCA GTCAAAGGAA 
TACAGAGAAT GGGTCAAAGA GGCGCTTCTT TCTCTTTTTG CTCCGCCCCT GGAAAAGTTC 
ATTGAAGCGG CCGTTGAAAA CCGGCGGTCG TCTTGA 

 

Protein sequence

MKQTKKKAKP KVPVAAEETG SKGEATRQKI IAAARKVFTR HPYHAASIRM IGEEGGFDYS 
IIHHYFTKAE LFRAVARQLY EELVTAYREW IDGVEHLTPT EGLKIYLDRS LDYLFEHPDV 
MEVLTQNAGH MKIDPDPPGF DFFTRYFREI EAIFIEKISV LTMQPELSMW SYTMMALHTA 
FVGSATYHGK ALGMDPQSKE YREWVKEALL SLFAPPLEKF IEAAVENRRS S