| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1296 |
|---|
| Symbol | |
|---|
| ID | 5694131 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1547055 |
|---|
| End bp | 1548086 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641263890 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001529179 |
|---|
| Protein GI | 158521309 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAA AGATAAATGT ATCGGTGGTT GTCCCGGTAT ATGATGTGGA AGCCTATATA
GCGGATTGCT TAAGTTCAAT CGTGTCCCAG ACCTTGACGG ACATGGAAAT CATCTGCATT
AATGACGGGA CCCCTGATGA TTCAATGGCA ATCGTCCGCG TATTTGCCGG CAGAGACGAC
AGGATTAAAA TTATTAACAA GGAAAACGGT GGGTTGTCTG ATACGCGCAA TGTGGGAATC
GATAATGCCA ACGGAGAGTA CATCTATTTT ATAGACAGTG ATGACTATCT GGACATCAGG
GCGCTGGAGA TGCTGTATGC AAAGGCCGTA CAAGAAAACC TGGATATTGT TTATTTCGAC
ACCAAGCCGG TTTTTGAGAC CCGTGAACTG AAAGAAAGAT TCAGGGGGTG TGAAGCCTAT
TATTCAAGAA AAAAGGCATA CGACGATGTT GTCACCGGAC AGGAGAAGCT GGTGGAGATG
GCTGAGAATA ACGATGTCCT GGTTCCGGTA TTTTTGCAGT TTTTCAAAAG AAGTTTCATT
CGCGACAATA ATATAAAATT TTACAAGGGG ATCCTTCATG AAGACAATTT GTTTTCCATG
CAGGTTGCCG CCCTGGCCCA ACGGGTCAGC CACATAAATG AATGTTTACA CATAAGACGC
ATCAGGCCTG GTTCCATCAT GACAGGAGAA AAACGCTTTG CAAATTCCTA CGGGTATTTC
ATCTGTGAGA TGGAGCTGAT CGAATTTTTA AAGGGCAGGG ATGTTTCGGC CGCATTCGGC
AAATACATTG ATGCCTTTCT CTCTAGTACA AGGCGGTTGG CGATTGATAT CATCGACAAT
TTACCCTTGG AAGAGGTTTT TTATGGTGTG AAGACAATGC CCCCGGACAT GCGGAAGGCA
TATGAGGATA TGATTTTAAG CCAGAGTAAT AAGAAACCCC ATTATGATAG AATAAAAAAC
AGGAAAAGGG TGTCGGTACT GGCAAAAATC ATTGGCATGG GAAAAAAGGG AGAATGCCGT
TTCGTCGGTT GA
|
|---|
| Protein sequence | MEKKINVSVV VPVYDVEAYI ADCLSSIVSQ TLTDMEIICI NDGTPDDSMA IVRVFAGRDD
RIKIINKENG GLSDTRNVGI DNANGEYIYF IDSDDYLDIR ALEMLYAKAV QENLDIVYFD
TKPVFETREL KERFRGCEAY YSRKKAYDDV VTGQEKLVEM AENNDVLVPV FLQFFKRSFI
RDNNIKFYKG ILHEDNLFSM QVAALAQRVS HINECLHIRR IRPGSIMTGE KRFANSYGYF
ICEMELIEFL KGRDVSAAFG KYIDAFLSST RRLAIDIIDN LPLEEVFYGV KTMPPDMRKA
YEDMILSQSN KKPHYDRIKN RKRVSVLAKI IGMGKKGECR FVG
|
|---|
| |