| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1287 |
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| Symbol | |
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| ID | 5694122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfococcus oleovorans Hxd3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009943 |
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| Strand | + |
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| Start bp | 1538325 |
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| End bp | 1539806 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641263881 |
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| Product | capsular polysaccharide biosynthesis protein-like protein |
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| Protein accession | YP_001529170 |
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| Protein GI | 158521300 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4421] Capsular polysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTGT TTCGAGACAA CAGATCGATG CGGCACGATG CCTTACGTCA CCCGCTGCCT
TCGAATATTG CCATCTGGTC ACCATCCGAT GATGATGGCG TTTTCCCGCT CGATGGCTTG
CGCCCCGCTA TCCGTCATAT AAACACGTCA TCTAAAAAAA AAGGCGACCC CCTTGCCAGG
CTGCGGGTGA CCTGGATGGG AAGGTTTTAC ACAAAGCATT TCAAGCGGTA CGCCTTTATT
CGATGGCTGG CGTCCTGGCT GTGGCGCAAC CTGTATCCGG TTTATCTCAA TTTTATTGCG
GGCCTTTCCA TTTATTTCCG TAACAGGAAG GCGATGAGAC GGCGGCGCCT GATAACCCTG
ACGGAATACG CGGCGGCGCA GCATCTGCAG AAAGTAAAAC TGGCCGATGC CGGCCTGGTA
AAAACACCGG CACCGGCAGT CTATCCTGCC GGTGACCGGG ACTGCCTGCA ATCACCTCAC
GAGGAGTACA TATTTCCGGA AGTGTTTGTC GCCAGCATTA AAAACGGTAT GGTCTATGGC
GGCACCAATC TTATATTGCT TGAAGACCAG GTGATTTGCC ACGACCTGTA CGATTTCAAA
CGGGACTACA CATCCGAGGA GATGCACGGC CGGACAGTGA TTGACCCCGC AGGCCGCCGT
ATTCGATGGA TACTCCATGA TGAGACGCCT GAACAGATTC CCATGGCCGC CGCCTTTGTC
GATGCCTGCG CGCCTAACTA TGCCCACTGG ATGACCGAGG TACTGCCCCG TATCGCCCTT
TTTTGTAATG AGCCCCGGTT TAATCGTATT CCCATTGTGG TGAACGACGG GCTTCATGAA
AACATAATGG AATCGCTGTT CTTCGTGGCC GGTCCGGAGC GTGAAATCAT CACCCTGCCG
ATCGGCAGGG CCTTGGCCAT CGACACCCTG TACCTAACAT CAGTGGCCGG TTATGTGCCT
TTTGAACGTC GCACCACCAA GCTTTCGGGA CACTCTCACG GCAGGTTCAG CCCACGGGCG
TTTGAACTGC TACGCGAGCG CATGGCAGTG CTTGACCCAA AGACCGGGAA CCGGGACTGG
CCGGAAAAAA TTGTTTTGCA CCGGAATTCG GGTTACAGAA AGGTCGTCAA TATAGATGAA
ATCGAAAGTG AACTGGTCGG CCGGGGTTAT GCTGTTGTTC AGCCTGAAAA GCTGACCTTT
TTACAGCAGG TCCACCTGTT CAGCCATGTA AAGCATATCG TGGGATCATC CGGTTCGGCC
CTGGCAAACA TGATGTTTGC TCCAAAAGAT GCGAAAATAA TAATCCTTTT GAATAAACAT
CCGGATACCA GTTACTGGTA TTGGCAGAAC ATGGCCTGCA CCTGCGGTAA CAGGATTCAC
TACGTGCTGG GAAAGTCGCG TGACATCGGT AACAACGGCA TCCATGCTGA TTTTGAAATC
CGCATGGATC ATCTGATTGC GTCGATAGAG GGAGAATCAT GA
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| Protein sequence | MPLFRDNRSM RHDALRHPLP SNIAIWSPSD DDGVFPLDGL RPAIRHINTS SKKKGDPLAR
LRVTWMGRFY TKHFKRYAFI RWLASWLWRN LYPVYLNFIA GLSIYFRNRK AMRRRRLITL
TEYAAAQHLQ KVKLADAGLV KTPAPAVYPA GDRDCLQSPH EEYIFPEVFV ASIKNGMVYG
GTNLILLEDQ VICHDLYDFK RDYTSEEMHG RTVIDPAGRR IRWILHDETP EQIPMAAAFV
DACAPNYAHW MTEVLPRIAL FCNEPRFNRI PIVVNDGLHE NIMESLFFVA GPEREIITLP
IGRALAIDTL YLTSVAGYVP FERRTTKLSG HSHGRFSPRA FELLRERMAV LDPKTGNRDW
PEKIVLHRNS GYRKVVNIDE IESELVGRGY AVVQPEKLTF LQQVHLFSHV KHIVGSSGSA
LANMMFAPKD AKIIILLNKH PDTSYWYWQN MACTCGNRIH YVLGKSRDIG NNGIHADFEI
RMDHLIASIE GES
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