| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1280 |
|---|
| Symbol | |
|---|
| ID | 5694115 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | + |
|---|
| Start bp | 1531750 |
|---|
| End bp | 1532709 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641263874 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_001529163 |
|---|
| Protein GI | 158521293 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACACA TGGATAAAAA ACGGGTCCTG GTGACCGGCG GCGCCGGTTT TCTGGGGTCT
CACCTGTGTG AGCGGCTTCT GGCCGACGGC TGCGAGGTGG TTTGCCTGGA CAATTTTTTT
ACCGGCCGAA AGCGCAATAT CGCCCATCTG CTGGCCAACC CGGATTTTGA ACTGCTGCGC
CACGACCTGG CCCACCAGCT CTTTATTGAG ACCGATGAAA TTTATAACCT GGCCTGCCCG
GCATCGCCGG TCCACTACCA GTACAATCCG GTCAAGACCG TTAAAACCAG CGTACTGGGG
GCCATTCACA TGCTGGGGCT GGCCAAGCGG GTCAAGGCGA AAATTCTTCA GGCATCCACC
AGCGAGGTCT ACGGAGACCC GGACGTGCAC CCCCAGACCG AGTATTACCG GGGCAACGTG
AACCCCATCG GCCCCCGGGC CTGCTACGAT GAAGGCAAAC GGTGCGCCGA GACCCTGTTT
TTTGACTACC ACCGCCAGAA CCGGGTCAAC ATCCGGGTGG TGCGGATTTT CAACACCTAC
GGCCCCCGTA TGCACCCCGA CGACGGCCGG GTGGTGAGCA ACTTCATCAT GGCGGCCCTT
CAGAACAGGG ACATCACGGT TTACGGTGAC GGCACCCAGA CCCGCTCCTT CTGCTACGTG
GATGACATGA TCGACGGGTT TATTCGCATG ATGAACGCGG ACGATGACTT TACCGGGCCG
GTGAACCTGG GCAATCCCCA GGAGATGACC GTGTTGGAGC TGGCAAAGGC GGTAATCGAC
CTGACCGGAT CCCGGTCGAA AATCGTTTTT AAGCCCCTTC CGGCAGACGA TCCCCGTCAG
CGGCGGCCCG ACATCACCCT GGCACGGGAA CGGCTCGGCT GGCAGCCCGG GGTGGGCCTG
GCCGAAGGCC TTGAAAAAAC GGTGCGCTAT TTCGAAGCTC TGATCGCGGG CAAACTTTAA
|
|---|
| Protein sequence | MGHMDKKRVL VTGGAGFLGS HLCERLLADG CEVVCLDNFF TGRKRNIAHL LANPDFELLR
HDLAHQLFIE TDEIYNLACP ASPVHYQYNP VKTVKTSVLG AIHMLGLAKR VKAKILQAST
SEVYGDPDVH PQTEYYRGNV NPIGPRACYD EGKRCAETLF FDYHRQNRVN IRVVRIFNTY
GPRMHPDDGR VVSNFIMAAL QNRDITVYGD GTQTRSFCYV DDMIDGFIRM MNADDDFTGP
VNLGNPQEMT VLELAKAVID LTGSRSKIVF KPLPADDPRQ RRPDITLARE RLGWQPGVGL
AEGLEKTVRY FEALIAGKL
|
|---|
| |