| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dole_1278 |
|---|
| Symbol | |
|---|
| ID | 5694113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfococcus oleovorans Hxd3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009943 |
|---|
| Strand | - |
|---|
| Start bp | 1529358 |
|---|
| End bp | 1530116 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641263872 |
|---|
| Product | purine phosphorylase family 1 |
|---|
| Protein accession | YP_001529161 |
|---|
| Protein GI | 158521291 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0775] Nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR03664] futalosine nucleosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGACC CCCGCATTCT CATTCTCACA GCCACCCCCG TGGAGGCCGC CCCCCTTGTT
GACCGGATTT CCGGGGCCAA TGCCGCCGGC AACAGGGTAA CCGGCATGCT GGGCGGCACG
CCGGTACGGG TGCTCGTCCC CGGCCCCGGG CCGGTGAACA CGGCCATGGC CCTTACCGCT
GTAATGGAAA AAACGCTTCC CGCGCTGGTC CTTCAGACCG GCTGCGGCGG CGGGTTCGCC
CAGGCCGGCA TCAACAAAGG GGATGTGGTG GTGGCAACGG AAATGATCGA CGTGCAGTCA
GGCGTCGAAC CGGCAACCCC CCCGGATATC GTGGATGCGC TGCCGTTTCC GGTTCTAAAA
ACCCCTGCCG GGGAGATCAC CAACCGCTAT CCGGCGGATA TTCGCCTTGC CGACACGGCC
TGCCGGGCCG CCCGCAACGC TCCCATGGCA ACGGGCTGCG GCGCGGCCAT GGGTCCCATC
GGATCGGTGG TCACCATCAC CGCCACAGAC CTCCGGGCCC AGGCCCTGTT TGACCGGTTC
GGCCTCTGCA TGGAGGCCAT GGAAGGAGCG GCCGCCGCCC ATGTCTGCCT GCACTACGGC
GTCCCCTTTC TTGAAATCCG TGGGGCCAGC AACATCGCGG GCCGCCGGGA CAGGGCCGAT
TGGGATATTC CCCTGGCCGC CACCAACGCG GCCATTAGCG TTTGCGCCTT TATTGCGGAA
TGGACCAAAA GACCGGAGGC GTGCGATGGC AAATGTTAA
|
|---|
| Protein sequence | MPDPRILILT ATPVEAAPLV DRISGANAAG NRVTGMLGGT PVRVLVPGPG PVNTAMALTA
VMEKTLPALV LQTGCGGGFA QAGINKGDVV VATEMIDVQS GVEPATPPDI VDALPFPVLK
TPAGEITNRY PADIRLADTA CRAARNAPMA TGCGAAMGPI GSVVTITATD LRAQALFDRF
GLCMEAMEGA AAAHVCLHYG VPFLEIRGAS NIAGRRDRAD WDIPLAATNA AISVCAFIAE
WTKRPEACDG KC
|
|---|
| |